Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 SSXP3-201ENST00000442971 1300 ntBASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
TRAPPC4Q9Y296 AC109446.4-201ENST00000623235 2755 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 RN7SKP250-201ENST00000363924 321 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 THEM7P-201ENST00000419556 672 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 RPS7P14-201ENST00000426405 583 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 VTI1BP4-201ENST00000427516 527 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AL645936.1-201ENST00000441979 518 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC016908.1-201ENST00000442571 1219 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 CXCR2P1-202ENST00000443392 1074 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC097359.1-201ENST00000447946 463 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 H3F3AP5-201ENST00000475267 429 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC044810.1-201ENST00000480271 711 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 RPL9P15-201ENST00000491096 532 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 ST13P12-201ENST00000508958 1094 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC095052.1-201ENST00000509955 863 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 CYP4F27P-201ENST00000514557 494 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC116917.1-201ENST00000520558 305 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 NATP-201ENST00000523491 878 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 OR6M2P-201ENST00000529831 871 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 MIR3189-201ENST00000578735 73 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 NPIPB1P-202ENST00000588786 828 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC244100.4-201ENST00000617747 388 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AC069542.2-201ENST00000624816 216 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 AP001157.1-201ENST00000550837 2339 ntBASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
TRAPPC4Q9Y296 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 RNU1-49P-201ENST00000363468 159 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 CCNT2P1-201ENST00000423082 1315 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 AC013403.1-201ENST00000436954 263 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 AL359091.1-201ENST00000449048 1734 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 RN7SL568P-201ENST00000493069 298 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 GUSBP9-201ENST00000510138 584 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 SNORA70.11-201ENST00000515987 138 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 SNORA70.13-201ENST00000516116 138 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 RNA5SP206-201ENST00000516703 121 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 AP003033.2-201ENST00000528901 805 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 OR4A41P-201ENST00000533053 928 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 AP001858.2-201ENST00000536213 601 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms