Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC8.81□□□□□ -1
USP35Q9P2H5 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC8.81□□□□□ -1
USP35Q9P2H5 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 CASC19-238ENST00000641523 1558 ntBASIC8.81□□□□□ -1
USP35Q9P2H5 AL139384.2-201ENST00000613809 3590 ntBASIC8.81□□□□□ -1
USP35Q9P2H5 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.8□□□□□ -1
USP35Q9P2H5 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.8□□□□□ -1
USP35Q9P2H5 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC8.8□□□□□ -1
USP35Q9P2H5 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 AL451142.1-201ENST00000375867 775 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 SNORA17A-201ENST00000391185 133 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC8.8□□□□□ -1
USP35Q9P2H5 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC8.8□□□□□ -1
USP35Q9P2H5 Z93019.1-201ENST00000416450 973 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 AL929472.1-201ENST00000417484 429 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 RPS7P12-201ENST00000422385 582 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 AC003989.1-201ENST00000434569 565 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC8.8□□□□□ -1
USP35Q9P2H5 MTND6P5-201ENST00000448266 512 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC8.8□□□□□ -1
USP35Q9P2H5 SETP12-201ENST00000514068 805 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 RFPL4AP3-201ENST00000515267 345 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC8.8□□□□□ -1
USP35Q9P2H5 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
USP35Q9P2H5 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 MRPS21P8-201ENST00000569196 235 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.8□□□□□ -1
USP35Q9P2H5 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC8.8□□□□□ -1
USP35Q9P2H5 AC007423.1-201ENST00000605009 627 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 AL352984.2-201ENST00000611153 546 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 AC103798.2-201ENST00000624292 632 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 AP003400.6-201ENST00000624698 740 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 SNORA17.5-201ENST00000630429 132 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.8□□□□□ -1
USP35Q9P2H5 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC8.8□□□□□ -1
USP35Q9P2H5 CLCA3P-203ENST00000490028 2781 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 AC010401.2-201ENST00000575137 4934 ntBASIC8.8□□□□□ -1
USP35Q9P2H5 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
USP35Q9P2H5 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC8.8□□□□□ -1
USP35Q9P2H5 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.8□□□□□ -1
USP35Q9P2H5 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.79□□□□□ -1
USP35Q9P2H5 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
USP35Q9P2H5 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
USP35Q9P2H5 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC8.79□□□□□ -1
USP35Q9P2H5 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
USP35Q9P2H5 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC8.79□□□□□ -1
USP35Q9P2H5 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.79□□□□□ -1
USP35Q9P2H5 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
USP35Q9P2H5 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.79□□□□□ -1
USP35Q9P2H5 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.79□□□□□ -1
USP35Q9P2H5 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC8.79□□□□□ -1
USP35Q9P2H5 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC8.79□□□□□ -1
USP35Q9P2H5 RPL9P21-201ENST00000392269 505 ntBASIC8.79□□□□□ -1
USP35Q9P2H5 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
USP35Q9P2H5 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC8.79□□□□□ -1
USP35Q9P2H5 AL353626.3-201ENST00000413399 657 ntBASIC8.79□□□□□ -1
USP35Q9P2H5 AC239367.3-201ENST00000428996 814 ntBASIC8.79□□□□□ -1
USP35Q9P2H5 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
USP35Q9P2H5 SULT1D1P-201ENST00000458020 882 ntBASIC8.79□□□□□ -1
USP35Q9P2H5 AC135721.2-201ENST00000464237 300 ntBASIC8.79□□□□□ -1
USP35Q9P2H5 RPL12P30-201ENST00000488389 499 ntBASIC8.79□□□□□ -1
USP35Q9P2H5 RPS4XP14-201ENST00000493072 781 ntBASIC8.79□□□□□ -1
USP35Q9P2H5 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC8.79□□□□□ -1
USP35Q9P2H5 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC8.79□□□□□ -1
USP35Q9P2H5 ODF1-202ENST00000518835 368 ntTSL 3 BASIC8.79□□□□□ -1
USP35Q9P2H5 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC8.79□□□□□ -1
USP35Q9P2H5 AC008507.3-201ENST00000585753 472 ntBASIC8.79□□□□□ -1
USP35Q9P2H5 AC092474.3-201ENST00000603022 568 ntBASIC8.79□□□□□ -1
USP35Q9P2H5 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.79□□□□□ -1
USP35Q9P2H5 MIR6811-201ENST00000620409 58 ntBASIC8.79□□□□□ -1
USP35Q9P2H5 AP001264.1-201ENST00000620602 703 ntBASIC8.79□□□□□ -1
USP35Q9P2H5 FO681491.1-202ENST00000623392 737 ntBASIC8.79□□□□□ -1
USP35Q9P2H5 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.79□□□□□ -1
USP35Q9P2H5 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC8.79□□□□□ -1
USP35Q9P2H5 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC8.79□□□□□ -1
USP35Q9P2H5 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
USP35Q9P2H5 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.79□□□□□ -1
USP35Q9P2H5 AP000641.1-201ENST00000531988 1639 ntBASIC8.79□□□□□ -1
USP35Q9P2H5 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC8.79□□□□□ -1
USP35Q9P2H5 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
USP35Q9P2H5 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
USP35Q9P2H5 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
USP35Q9P2H5 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC8.79□□□□□ -1
USP35Q9P2H5 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms