Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 OR4A41P-201ENST00000533053 928 ntBASIC6.33□□□□□ -1.4
PCDH9Q9HC56 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 AC121758.1-202ENST00000556917 658 ntBASIC6.33□□□□□ -1.4
PCDH9Q9HC56 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 RN7SL230P-201ENST00000580835 303 ntBASIC6.33□□□□□ -1.4
PCDH9Q9HC56 RNU4ATAC-201ENST00000580972 127 ntBASIC6.33□□□□□ -1.4
PCDH9Q9HC56 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 AL049840.6-201ENST00000604583 345 ntBASIC6.33□□□□□ -1.4
PCDH9Q9HC56 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 uc_338.29-201ENST00000615099 168 ntBASIC6.33□□□□□ -1.4
PCDH9Q9HC56 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDH9Q9HC56 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 OFD1P17-201ENST00000437639 3018 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 RNA5SP346-201ENST00000363541 121 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AL139805.1-201ENST00000407837 289 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 RNA5SP198-201ENST00000410376 127 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 PPIAP10-201ENST00000438675 458 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AL645936.1-201ENST00000441979 518 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AL133351.3-201ENST00000454998 193 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 YRDCP3-201ENST00000456507 480 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AC106822.1-201ENST00000502647 526 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AC244502.2-201ENST00000543361 851 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AP001267.4-201ENST00000602598 545 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AC005828.7-201ENST00000607331 556 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AC024651.2-201ENST00000562480 2098 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 AL133243.2-201ENST00000610331 1621 ntBASIC6.32□□□□□ -1.4
PCDH9Q9HC56 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDH9Q9HC56 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 AC130360.2-201ENST00000533477 1556 ntBASIC6.31□□□□□ -1.4
PCDH9Q9HC56 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 OR2W4P-201ENST00000406496 926 ntBASIC6.31□□□□□ -1.4
PCDH9Q9HC56 PTCD2P2-201ENST00000415579 1095 ntBASIC6.31□□□□□ -1.4
PCDH9Q9HC56 AL139158.1-201ENST00000424719 340 ntBASIC6.31□□□□□ -1.4
PCDH9Q9HC56 AC099782.1-201ENST00000425889 474 ntBASIC6.31□□□□□ -1.4
PCDH9Q9HC56 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH9Q9HC56 RPL23AP60-201ENST00000450011 454 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms