Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 SNORA64.3-201ENST00000365647 134 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 RAB5CP1-201ENST00000395972 580 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
HPS3Q969F9 CXADRP1-201ENST00000398098 1095 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 VIM2P-201ENST00000402383 1294 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 DHFRP2-201ENST00000414224 547 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 RAB9AP4-201ENST00000415230 609 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC7.03□□□□□ -1.28
HPS3Q969F9 AC073464.3-201ENST00000422564 712 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.03□□□□□ -1.28
HPS3Q969F9 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.03□□□□□ -1.28
HPS3Q969F9 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 AL645939.3-201ENST00000435408 225 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 AC096632.2-201ENST00000438139 1239 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.03□□□□□ -1.28
HPS3Q969F9 GXYLT1P1-201ENST00000446657 490 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.03□□□□□ -1.28
HPS3Q969F9 RN7SL39P-201ENST00000462264 297 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.03□□□□□ -1.28
HPS3Q969F9 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.03□□□□□ -1.28
HPS3Q969F9 AC016550.1-201ENST00000505348 785 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.03□□□□□ -1.28
HPS3Q969F9 RNA5SP206-201ENST00000516703 121 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.03□□□□□ -1.28
HPS3Q969F9 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.03□□□□□ -1.28
HPS3Q969F9 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.03□□□□□ -1.28
HPS3Q969F9 AC025283.1-201ENST00000572039 734 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.03□□□□□ -1.28
HPS3Q969F9 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.03□□□□□ -1.28
HPS3Q969F9 AC005332.4-201ENST00000592752 579 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 CXADRP3-202ENST00000617265 1100 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 AC089999.3-201ENST00000622440 577 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.03□□□□□ -1.28
HPS3Q969F9 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
HPS3Q969F9 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 AC217777.1-201ENST00000570034 1471 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.03□□□□□ -1.28
HPS3Q969F9 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.03□□□□□ -1.28
HPS3Q969F9 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.02□□□□□ -1.28
HPS3Q969F9 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
HPS3Q969F9 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
HPS3Q969F9 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HPS3Q969F9 SNORD16-201ENST00000362803 99 ntBASIC7.02□□□□□ -1.29
HPS3Q969F9 RNA5SP478-201ENST00000364657 115 ntBASIC7.02□□□□□ -1.29
HPS3Q969F9 AL356057.1-202ENST00000402263 756 ntBASIC7.02□□□□□ -1.29
HPS3Q969F9 UBE2V1P14-201ENST00000415815 558 ntBASIC7.02□□□□□ -1.29
HPS3Q969F9 RPS7P14-201ENST00000426405 583 ntBASIC7.02□□□□□ -1.29
HPS3Q969F9 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.02□□□□□ -1.29
HPS3Q969F9 RAB9AP5-201ENST00000437794 597 ntBASIC7.02□□□□□ -1.29
HPS3Q969F9 RAB9AP2-201ENST00000443911 597 ntBASIC7.02□□□□□ -1.29
HPS3Q969F9 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.02□□□□□ -1.29
HPS3Q969F9 KF459542.1-201ENST00000450908 553 ntBASIC7.02□□□□□ -1.29
HPS3Q969F9 RN7SL165P-201ENST00000477476 291 ntBASIC7.02□□□□□ -1.29
HPS3Q969F9 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC7.02□□□□□ -1.29
HPS3Q969F9 RNU6-319P-201ENST00000516025 108 ntBASIC7.02□□□□□ -1.29
HPS3Q969F9 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.02□□□□□ -1.29
HPS3Q969F9 AC135983.3-201ENST00000528049 1226 ntBASIC7.02□□□□□ -1.29
HPS3Q969F9 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.02□□□□□ -1.29
HPS3Q969F9 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.02□□□□□ -1.29
HPS3Q969F9 AL139022.2-201ENST00000606934 443 ntBASIC7.02□□□□□ -1.29
HPS3Q969F9 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.02□□□□□ -1.29
HPS3Q969F9 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HPS3Q969F9 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
HPS3Q969F9 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HPS3Q969F9 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
HPS3Q969F9 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HPS3Q969F9 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.02□□□□□ -1.29
HPS3Q969F9 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HPS3Q969F9 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.02□□□□□ -1.29
HPS3Q969F9 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HPS3Q969F9 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 AL133243.2-201ENST00000610331 1621 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.01□□□□□ -1.29
HPS3Q969F9 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.01□□□□□ -1.29
HPS3Q969F9 CR382285.2-201ENST00000624662 1495 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
HPS3Q969F9 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.01□□□□□ -1.29
HPS3Q969F9 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
HPS3Q969F9 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 AL157702.1-201ENST00000398764 426 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HPS3Q969F9 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.01□□□□□ -1.29
HPS3Q969F9 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.01□□□□□ -1.29
HPS3Q969F9 AC007568.1-201ENST00000422912 471 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.01□□□□□ -1.29
HPS3Q969F9 AC073508.1-201ENST00000428866 656 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 AC064862.5-201ENST00000440618 334 ntBASIC7.01□□□□□ -1.29
HPS3Q969F9 AL451063.1-201ENST00000450164 1133 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms