Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS4Q8IUM7 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS4Q8IUM7 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS4Q8IUM7 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS4Q8IUM7 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC7.7□□□□□ -1.18
NPAS4Q8IUM7 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 RNU6-353P-201ENST00000364266 108 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 FAM204BP-201ENST00000369171 701 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 BMS1P3-201ENST00000372011 932 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 Y_RNA.436-201ENST00000384097 102 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 ERHP2-201ENST00000402323 299 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 OR6K4P-201ENST00000423179 955 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC007365.2-201ENST00000428806 458 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 PRELID3BP10-201ENST00000431957 584 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 HMGB3P10-201ENST00000434734 572 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AL445991.1-201ENST00000450381 475 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC233982.1-201ENST00000451247 436 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC234781.3-201ENST00000452540 973 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 RN7SKP198-201ENST00000459286 306 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 RNU7-140P-201ENST00000459546 60 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 RN7SL393P-201ENST00000463588 296 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 UOX-201ENST00000471089 899 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC104687.1-201ENST00000485829 412 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 SUMO2P4-201ENST00000504193 276 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AF213884.2-201ENST00000510417 903 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 NDUFB4P12-201ENST00000513465 390 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 RNU6-1129P-201ENST00000515964 104 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 SCARNA6-201ENST00000515982 265 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AP005902.2-201ENST00000518393 307 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 KCTD9P4-201ENST00000526766 1166 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC087465.1-201ENST00000560574 245 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC012213.3-201ENST00000577199 777 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 EIF4A3P1-201ENST00000578499 647 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC011447.2-201ENST00000592921 283 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC019257.2-201ENST00000605539 497 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 MRPL57P3-201ENST00000619218 176 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC024595.1-201ENST00000623088 387 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 PARP4P1-201ENST00000435945 2337 ntBASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS4Q8IUM7 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AC092821.3-202ENST00000641304 2767 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 OR51A10P-201ENST00000307165 937 ntBASIC7.68□□□□□ -1.18
NPAS4Q8IUM7 SNORD113-6-201ENST00000363345 75 ntBASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms