Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RN7SL39P-201ENST00000462264 297 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 CYCSP25-201ENST00000525280 316 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AL358913.1-201ENST00000554342 121 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 EIF1AXP2-201ENST00000555940 413 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 MT1CP-201ENST00000567054 174 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AL589863.1-201ENST00000595383 631 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AL589765.6-201ENST00000601909 549 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AC012368.3-201ENST00000604190 219 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AC067838.1-201ENST00000606064 577 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 MIR6823-201ENST00000622118 61 ntBASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NUP54Q7Z3B4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 LINC01613-201ENST00000561476 2780 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 OR13C3-201ENST00000374781 1108 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 GAPDHP15-201ENST00000398586 975 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AL121977.1-201ENST00000401636 979 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 RPL21P50-201ENST00000417698 477 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AL355355.1-201ENST00000442900 793 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 CCNJP2-201ENST00000457810 1163 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 RNA5SP418-201ENST00000515951 117 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AC110056.1-201ENST00000525759 911 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AP001000.1-201ENST00000526843 742 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 HNRNPRP2-201ENST00000528421 743 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AC073916.1-201ENST00000545095 130 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AC011497.2-201ENST00000600255 639 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 AC074140.1-201ENST00000621617 208 ntBASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NUP54Q7Z3B4 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
NUP54Q7Z3B4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.9□□□□□ -1.47
NUP54Q7Z3B4 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.47
NUP54Q7Z3B4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.9□□□□□ -1.47
NUP54Q7Z3B4 AC119674.1-213ENST00000641177 1386 ntBASIC5.9□□□□□ -1.47
NUP54Q7Z3B4 AC022034.1-201ENST00000512867 2156 ntBASIC5.9□□□□□ -1.47
NUP54Q7Z3B4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NUP54Q7Z3B4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NUP54Q7Z3B4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NUP54Q7Z3B4 AC096921.2-201ENST00000561507 1916 ntBASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NUP54Q7Z3B4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms