Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 RN7SKP27-201ENST00000410684 333 ntBASIC4.69□□□□□ -1.66
VPS13CQ709C8 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.69□□□□□ -1.66
VPS13CQ709C8 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 BNIP3P1-201ENST00000547295 580 ntBASIC4.69□□□□□ -1.66
VPS13CQ709C8 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 AC015720.2-201ENST00000567709 334 ntBASIC4.69□□□□□ -1.66
VPS13CQ709C8 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 AC145423.1-201ENST00000605712 336 ntBASIC4.69□□□□□ -1.66
VPS13CQ709C8 AL450226.2-201ENST00000622913 439 ntBASIC4.69□□□□□ -1.66
VPS13CQ709C8 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.69□□□□□ -1.66
VPS13CQ709C8 MGAT2P2-201ENST00000427194 797 ntBASIC4.69□□□□□ -1.66
VPS13CQ709C8 AC104837.2-201ENST00000427236 424 ntBASIC4.69□□□□□ -1.66
VPS13CQ709C8 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 IRF5P1-201ENST00000504852 2164 ntBASIC4.69□□□□□ -1.66
VPS13CQ709C8 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS13CQ709C8 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 AC025678.3-201ENST00000623619 4824 ntBASIC4.69□□□□□ -1.66
VPS13CQ709C8 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS13CQ709C8 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 MIR5095-201ENST00000578844 88 ntBASIC4.68□□□□□ -1.66
VPS13CQ709C8 AL023583.1-201ENST00000607518 1143 ntBASIC4.68□□□□□ -1.66
VPS13CQ709C8 CYP4F35P-202ENST00000636121 390 ntBASIC4.68□□□□□ -1.66
VPS13CQ709C8 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 SELE-205ENST00000367777 3576 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 MIGA1-201ENST00000370791 5288 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 SAR1B-201ENST00000402673 6682 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 RPL23AP18-201ENST00000416139 468 ntBASIC4.68□□□□□ -1.66
VPS13CQ709C8 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 AC073648.4-201ENST00000442655 781 ntBASIC4.68□□□□□ -1.66
VPS13CQ709C8 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 AL603882.1-201ENST00000463059 681 ntBASIC4.68□□□□□ -1.66
VPS13CQ709C8 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 NWD1-201ENST00000379808 7254 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 AC092070.2-203ENST00000598377 3644 ntBASIC4.68□□□□□ -1.66
VPS13CQ709C8 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 AGPAT4-203ENST00000366911 7705 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS13CQ709C8 MORF4L1P5-201ENST00000433352 961 ntBASIC4.68□□□□□ -1.66
VPS13CQ709C8 OR6D1P-201ENST00000436165 939 ntBASIC4.68□□□□□ -1.66
VPS13CQ709C8 AC023141.8-201ENST00000442554 208 ntBASIC4.68□□□□□ -1.66
VPS13CQ709C8 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.68□□□□□ -1.66
VPS13CQ709C8 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 OR56A7P-201ENST00000524865 941 ntBASIC4.68□□□□□ -1.66
VPS13CQ709C8 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS13CQ709C8 AC015818.6-201ENST00000584274 634 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms