Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AL731532.1-201ENST00000623972 4236 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AKAP17BP-201ENST00000431706 2719 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC073310.1-201ENST00000423226 1033 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 VN1R20P-201ENST00000425215 966 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC013403.1-201ENST00000436954 263 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AL512593.1-201ENST00000444758 779 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC114728.1-201ENST00000488289 483 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 ZNF519P4-201ENST00000514008 125 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 CYP4F27P-201ENST00000514557 494 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 RNA5SP434-201ENST00000516647 121 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC116917.1-201ENST00000520558 305 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC026688.1-201ENST00000520639 1168 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC008429.4-201ENST00000521201 182 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 NATP-201ENST00000523491 878 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC067805.1-201ENST00000559344 470 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC090330.1-201ENST00000588646 764 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC245128.3-201ENST00000594721 748 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC004890.3-201ENST00000605566 1095 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 RPSAP75-201ENST00000605848 301 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC141002.1-201ENST00000607025 279 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 RN7SL261P-201ENST00000613441 282 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC012676.3-201ENST00000614983 479 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC107905.1-201ENST00000616204 426 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC024651.2-201ENST00000562480 2098 ntBASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
ZNF549Q6P9A3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.09□□□□□ -1.44
ZNF549Q6P9A3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ZNF549Q6P9A3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
ZNF549Q6P9A3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
ZNF549Q6P9A3 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.09□□□□□ -1.44
ZNF549Q6P9A3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
ZNF549Q6P9A3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
ZNF549Q6P9A3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 AL121835.1-201ENST00000404250 354 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 RN7SKP108-201ENST00000411367 328 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 PTCD2P2-201ENST00000415579 1095 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 FAM183DP-201ENST00000421987 399 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 RPL7AP51-201ENST00000422016 760 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 AL590004.3-202ENST00000445883 451 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 GXYLT1P1-201ENST00000446657 490 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 AL445687.2-201ENST00000458156 728 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms