Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RPL23AP40-201ENST00000487630 390 ntBASIC8.83□□□□□ -1
CDC42BPAQ5VT25 SCARNA6.1-201ENST00000516989 238 ntBASIC8.83□□□□□ -1
CDC42BPAQ5VT25 AC090424.1-201ENST00000535243 736 ntBASIC8.83□□□□□ -1
CDC42BPAQ5VT25 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 AC008115.4-201ENST00000619780 775 ntBASIC8.83□□□□□ -1
CDC42BPAQ5VT25 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 AC092821.2-201ENST00000545710 2042 ntBASIC8.83□□□□□ -1
CDC42BPAQ5VT25 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 AL355377.1-201ENST00000621125 1653 ntBASIC8.83□□□□□ -1
CDC42BPAQ5VT25 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 AC008957.3-201ENST00000624112 2242 ntBASIC8.83□□□□□ -1
CDC42BPAQ5VT25 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 SNORA70-201ENST00000384436 135 ntBASIC8.83□□□□□ -1
CDC42BPAQ5VT25 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 CYCSP6-201ENST00000434498 302 ntBASIC8.83□□□□□ -1
CDC42BPAQ5VT25 NDUFA5P12-201ENST00000503796 343 ntBASIC8.83□□□□□ -1
CDC42BPAQ5VT25 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.83□□□□□ -1
CDC42BPAQ5VT25 AC130304.1-201ENST00000622942 2385 ntBASIC8.82□□□□□ -1
CDC42BPAQ5VT25 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC8.82□□□□□ -1
CDC42BPAQ5VT25 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC8.82□□□□□ -1
CDC42BPAQ5VT25 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC8.82□□□□□ -1
CDC42BPAQ5VT25 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8.82□□□□□ -1
CDC42BPAQ5VT25 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.82□□□□□ -1
CDC42BPAQ5VT25 USP9YP3-201ENST00000434481 1766 ntBASIC8.82□□□□□ -1
CDC42BPAQ5VT25 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC8.82□□□□□ -1
CDC42BPAQ5VT25 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.82□□□□□ -1
CDC42BPAQ5VT25 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.82□□□□□ -1
CDC42BPAQ5VT25 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC8.82□□□□□ -1
CDC42BPAQ5VT25 NENFP1-201ENST00000419476 466 ntBASIC8.82□□□□□ -1
CDC42BPAQ5VT25 CYCSP12-201ENST00000437729 300 ntBASIC8.82□□□□□ -1
CDC42BPAQ5VT25 RN7SL329P-201ENST00000467740 299 ntBASIC8.82□□□□□ -1
CDC42BPAQ5VT25 AC087672.1-201ENST00000479876 766 ntBASIC8.82□□□□□ -1
CDC42BPAQ5VT25 HIGD1AP14-201ENST00000507617 282 ntBASIC8.82□□□□□ -1
CDC42BPAQ5VT25 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.82□□□□□ -1
CDC42BPAQ5VT25 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC8.82□□□□□ -1
CDC42BPAQ5VT25 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
CDC42BPAQ5VT25 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 RNA5SP514-201ENST00000363717 111 ntBASIC8.81□□□□□ -1
CDC42BPAQ5VT25 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 OTX2P1-201ENST00000450956 354 ntBASIC8.81□□□□□ -1
CDC42BPAQ5VT25 AC004815.1-201ENST00000484185 331 ntBASIC8.81□□□□□ -1
CDC42BPAQ5VT25 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 CCDC11P1-201ENST00000503137 1162 ntBASIC8.81□□□□□ -1
CDC42BPAQ5VT25 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 MIR6730-201ENST00000622213 67 ntBASIC8.81□□□□□ -1
CDC42BPAQ5VT25 THAP12P9-201ENST00000503971 2360 ntBASIC8.81□□□□□ -1
CDC42BPAQ5VT25 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC8.81□□□□□ -1
CDC42BPAQ5VT25 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 AC023141.8-201ENST00000442554 208 ntBASIC8.8□□□□□ -1
CDC42BPAQ5VT25 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 AC005297.1-201ENST00000444765 862 ntBASIC8.8□□□□□ -1
CDC42BPAQ5VT25 RN7SL172P-201ENST00000460535 303 ntBASIC8.8□□□□□ -1
CDC42BPAQ5VT25 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC8.8□□□□□ -1
CDC42BPAQ5VT25 AL590004.4-201ENST00000566733 7060 ntBASIC8.8□□□□□ -1
CDC42BPAQ5VT25 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms