Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 TDGP1-201ENST00000543961 1229 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 CBX3P2-202ENST00000583365 535 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AC004908.1-201ENST00000606572 541 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AC011503.2-201ENST00000594230 1500 ntBASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CCDC144BQ3MJ40 AP000641.1-201ENST00000531988 1639 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AC034229.2-201ENST00000566945 2508 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 SNORD35A-201ENST00000363389 86 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 RNU4-27P-201ENST00000410889 139 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AL158050.1-201ENST00000416077 457 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AL160175.1-201ENST00000428124 247 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 RPL7P55-201ENST00000450522 746 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 BZW1P1-201ENST00000454901 1240 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AC008379.1-201ENST00000463655 464 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AC115223.1-201ENST00000466377 870 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 YWHAZP1-201ENST00000556286 722 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AC134669.1-201ENST00000581275 672 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AC120057.5-201ENST00000623840 154 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AC004808.1-201ENST00000627671 721 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 AL121936.2-201ENST00000641935 662 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
CCDC144BQ3MJ40 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 RNA5SP474-201ENST00000391234 90 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AL024507.1-201ENST00000412741 274 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 GAPDHP57-201ENST00000424400 585 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC011242.1-201ENST00000433596 1158 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AC092106.2-201ENST00000436597 487 ntBASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.69□□□□□ -1.18
CCDC144BQ3MJ40 SNRPBP1-201ENST00000443634 282 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms