Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 OR2M1P-201ENST00000318104 951 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 RNU1-49P-201ENST00000363468 159 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 RNA5SP284-201ENST00000384547 118 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 MTND4LP17-201ENST00000414607 293 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 MTND2P3-201ENST00000452458 470 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 TAAR4P-201ENST00000454843 1039 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 VPS25P1-201ENST00000455691 508 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 COL6A4P2-205ENST00000509855 506 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AC090958.1-201ENST00000511122 351 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 RPA2P1-201ENST00000556557 721 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AC009268.1-201ENST00000561352 1203 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AC020978.7-201ENST00000575953 1187 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AP005119.1-201ENST00000580956 292 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AC139493.1-201ENST00000604368 397 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AP005131.7-201ENST00000610087 611 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AC109309.2-201ENST00000612597 332 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 AL359195.2-201ENST00000623657 4412 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 PSG10P-201ENST00000501199 1500 ntBASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM71Q2Q1W2 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 RBMY1HP-201ENST00000382759 1389 ntBASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 RNU6-386P-201ENST00000362650 107 ntBASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 RNU1-134P-201ENST00000362935 165 ntBASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AC019070.1-201ENST00000415008 1024 ntBASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AC079355.1-201ENST00000421770 223 ntBASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 RPL12P12-201ENST00000424633 501 ntBASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 PPIAP10-201ENST00000438675 458 ntBASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 MORF4-201ENST00000447135 971 ntBASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 RPL31P15-201ENST00000449770 338 ntBASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AC128716.1-201ENST00000475129 166 ntBASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 RWDD4P1-201ENST00000488019 565 ntBASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 IGLV3-6-201ENST00000523937 250 ntBASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AL121579.2-201ENST00000555466 590 ntBASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM71Q2Q1W2 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms