Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RPL6P21-201ENST00000418672 846 ntBASIC7.09□□□□□ -1.27
GABPAQ06546 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.09□□□□□ -1.27
GABPAQ06546 AL022319.1-201ENST00000458183 1167 ntBASIC7.09□□□□□ -1.27
GABPAQ06546 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.09□□□□□ -1.27
GABPAQ06546 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
GABPAQ06546 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.09□□□□□ -1.27
GABPAQ06546 WBP1LP3-201ENST00000523033 208 ntBASIC7.09□□□□□ -1.27
GABPAQ06546 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.09□□□□□ -1.27
GABPAQ06546 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
GABPAQ06546 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.09□□□□□ -1.27
GABPAQ06546 AC006530.1-201ENST00000555980 571 ntBASIC7.09□□□□□ -1.27
GABPAQ06546 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.09□□□□□ -1.27
GABPAQ06546 ZNF322P1-201ENST00000568013 1209 ntBASIC7.09□□□□□ -1.27
GABPAQ06546 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.09□□□□□ -1.27
GABPAQ06546 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.09□□□□□ -1.27
GABPAQ06546 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.09□□□□□ -1.27
GABPAQ06546 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.09□□□□□ -1.27
GABPAQ06546 SNORA17.5-201ENST00000630429 132 ntBASIC7.09□□□□□ -1.27
GABPAQ06546 AC116667.2-201ENST00000641075 823 ntBASIC7.09□□□□□ -1.27
GABPAQ06546 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
GABPAQ06546 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
GABPAQ06546 AL391262.1-201ENST00000556558 1992 ntBASIC7.09□□□□□ -1.27
GABPAQ06546 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
GABPAQ06546 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
GABPAQ06546 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.09□□□□□ -1.27
GABPAQ06546 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.09□□□□□ -1.28
GABPAQ06546 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.09□□□□□ -1.28
GABPAQ06546 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
GABPAQ06546 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
GABPAQ06546 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.08□□□□□ -1.28
GABPAQ06546 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
GABPAQ06546 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
GABPAQ06546 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
GABPAQ06546 AC016583.1-201ENST00000624221 2431 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.08□□□□□ -1.28
GABPAQ06546 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.08□□□□□ -1.28
GABPAQ06546 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
GABPAQ06546 RN7SKP128-201ENST00000364270 303 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 OR7E101P-201ENST00000400428 513 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 AC016739.1-201ENST00000405359 345 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.08□□□□□ -1.28
GABPAQ06546 NMD3P2-201ENST00000421815 761 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 AC007562.1-201ENST00000421819 517 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.08□□□□□ -1.28
GABPAQ06546 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.08□□□□□ -1.28
GABPAQ06546 AL445928.1-201ENST00000435545 222 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 TUBB4BP6-201ENST00000437576 479 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 AC023274.2-201ENST00000445264 521 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 RPL31P15-201ENST00000449770 338 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 PPIAP20-201ENST00000449839 135 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.08□□□□□ -1.28
GABPAQ06546 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.08□□□□□ -1.28
GABPAQ06546 NXT1P1-201ENST00000458481 316 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.08□□□□□ -1.28
GABPAQ06546 AC104109.1-201ENST00000498563 436 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.08□□□□□ -1.28
GABPAQ06546 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.08□□□□□ -1.28
GABPAQ06546 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.08□□□□□ -1.28
GABPAQ06546 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
GABPAQ06546 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
GABPAQ06546 AC011497.2-201ENST00000600255 639 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.08□□□□□ -1.28
GABPAQ06546 CYCSP1-201ENST00000604815 315 ntBASIC7.08□□□□□ -1.28
GABPAQ06546 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.08□□□□□ -1.28
GABPAQ06546 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
GABPAQ06546 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.08□□□□□ -1.28
GABPAQ06546 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
GABPAQ06546 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
GABPAQ06546 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
GABPAQ06546 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.08□□□□□ -1.28
GABPAQ06546 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
GABPAQ06546 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.08□□□□□ -1.28
GABPAQ06546 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
GABPAQ06546 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
GABPAQ06546 AC015689.2-201ENST00000528172 1738 ntBASIC7.07□□□□□ -1.28
GABPAQ06546 AC005034.3-201ENST00000604845 1747 ntBASIC7.07□□□□□ -1.28
GABPAQ06546 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.07□□□□□ -1.28
GABPAQ06546 AP000866.6-201ENST00000638898 3579 ntBASIC7.07□□□□□ -1.28
GABPAQ06546 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
GABPAQ06546 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
GABPAQ06546 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
GABPAQ06546 RN7SKP81-201ENST00000365603 331 ntBASIC7.07□□□□□ -1.28
GABPAQ06546 AC087752.1-201ENST00000391360 558 ntBASIC7.07□□□□□ -1.28
GABPAQ06546 AC245060.4-201ENST00000413293 1121 ntBASIC7.07□□□□□ -1.28
GABPAQ06546 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.07□□□□□ -1.28
GABPAQ06546 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.07□□□□□ -1.28
GABPAQ06546 RPS7P3-201ENST00000443360 580 ntBASIC7.07□□□□□ -1.28
GABPAQ06546 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
GABPAQ06546 CT45A11P-201ENST00000448043 1134 ntBASIC7.07□□□□□ -1.28
GABPAQ06546 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
GABPAQ06546 SDC4P-201ENST00000453285 601 ntBASIC7.07□□□□□ -1.28
GABPAQ06546 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.07□□□□□ -1.28
GABPAQ06546 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.07□□□□□ -1.28
GABPAQ06546 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.07□□□□□ -1.28
GABPAQ06546 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.07□□□□□ -1.28
GABPAQ06546 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.07□□□□□ -1.28
GABPAQ06546 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.07□□□□□ -1.28
GABPAQ06546 AL021918.2-201ENST00000613415 194 ntBASIC7.07□□□□□ -1.28
GABPAQ06546 AC016542.2-201ENST00000624201 619 ntBASIC7.07□□□□□ -1.28
GABPAQ06546 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms