Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC126615.2-201ENST00000553003 515 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HSPG2P98160 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC3.54□□□□□ -1.84
HSPG2P98160 AL355974.3-201ENST00000617383 467 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 SAMMSON-209ENST00000641222 1100 ntBASIC3.54□□□□□ -1.84
HSPG2P98160 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 DAB1-206ENST00000414851 5168 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HSPG2P98160 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 BDP1-201ENST00000358731 11073 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HSPG2P98160 FHL2-207ENST00000409177 4881 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 AC092724.1-201ENST00000624623 3397 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
HSPG2P98160 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HSPG2P98160 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HSPG2P98160 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.53□□□□□ -1.84
HSPG2P98160 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.53□□□□□ -1.84
HSPG2P98160 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.53□□□□□ -1.84
HSPG2P98160 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.53□□□□□ -1.84
HSPG2P98160 AC069307.1-201ENST00000602820 447 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 AC090527.3-201ENST00000619041 548 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC3.53□□□□□ -1.84
HSPG2P98160 MFSD8-218ENST00000641186 4448 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HSPG2P98160 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC3.53□□□□□ -1.84
HSPG2P98160 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
HSPG2P98160 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HSPG2P98160 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HSPG2P98160 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC3.53□□□□□ -1.84
HSPG2P98160 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.53□□□□□ -1.84
HSPG2P98160 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 RNU1-43P-201ENST00000365052 165 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 RNU6-398P-201ENST00000384143 109 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 RPL38P3-201ENST00000484463 213 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 RN7SL604P-201ENST00000492589 296 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC3.53□□□□□ -1.84
HSPG2P98160 CYCSP29-201ENST00000533731 318 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC3.53□□□□□ -1.84
HSPG2P98160 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC3.53□□□□□ -1.84
HSPG2P98160 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC3.53□□□□□ -1.84
HSPG2P98160 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.53□□□□□ -1.84
HSPG2P98160 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC3.53□□□□□ -1.84
HSPG2P98160 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC3.53□□□□□ -1.84
HSPG2P98160 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC3.53□□□□□ -1.84
HSPG2P98160 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 SERPINA10-201ENST00000261994 4978 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC3.53□□□□□ -1.84
HSPG2P98160 AC100871.1-201ENST00000507871 1456 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC3.53□□□□□ -1.84
HSPG2P98160 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HSPG2P98160 RNU1-77P-201ENST00000390868 162 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.53□□□□□ -1.84
HSPG2P98160 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HSPG2P98160 AC007064.3-201ENST00000422608 359 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 AC012512.1-201ENST00000446594 718 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 RPS23P7-201ENST00000466210 444 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 AC068522.1-201ENST00000482895 345 ntBASIC3.53□□□□□ -1.84
HSPG2P98160 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.53□□□□□ -1.84
HSPG2P98160 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.53□□□□□ -1.84
HSPG2P98160 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.53□□□□□ -1.84
HSPG2P98160 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HSPG2P98160 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 IQCB2P-201ENST00000401788 1633 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 MIR1193-201ENST00000408109 78 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC3.52□□□□□ -1.85
HSPG2P98160 TRY2P-201ENST00000448860 689 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 AC034236.1-201ENST00000469891 373 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.52□□□□□ -1.85
HSPG2P98160 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 AP002373.2-201ENST00000541631 1060 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.52□□□□□ -1.85
HSPG2P98160 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 AC135068.12-201ENST00000637370 931 ntBASIC3.52□□□□□ -1.85
HSPG2P98160 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC3.52□□□□□ -1.85
HSPG2P98160 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HSPG2P98160 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HSPG2P98160 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.52□□□□□ -1.85
HSPG2P98160 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 525.2 ms