Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 USP9YP3-201ENST00000434481 1766 ntBASIC5.37□□□□□ -1.55
UBA52P62987 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UBA52P62987 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
UBA52P62987 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
UBA52P62987 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.36□□□□□ -1.55
UBA52P62987 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBA52P62987 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
UBA52P62987 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.36□□□□□ -1.55
UBA52P62987 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBA52P62987 RNA5SP453-201ENST00000362503 119 ntBASIC5.36□□□□□ -1.55
UBA52P62987 YWHAZP6-201ENST00000399764 738 ntBASIC5.36□□□□□ -1.55
UBA52P62987 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.36□□□□□ -1.55
UBA52P62987 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBA52P62987 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.36□□□□□ -1.55
UBA52P62987 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBA52P62987 AC239367.3-201ENST00000428996 814 ntBASIC5.36□□□□□ -1.55
UBA52P62987 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBA52P62987 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.36□□□□□ -1.55
UBA52P62987 AL035690.1-201ENST00000490892 383 ntBASIC5.36□□□□□ -1.55
UBA52P62987 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.36□□□□□ -1.55
UBA52P62987 UGT2A3P7-201ENST00000510485 734 ntBASIC5.36□□□□□ -1.55
UBA52P62987 AC008429.4-201ENST00000521201 182 ntBASIC5.36□□□□□ -1.55
UBA52P62987 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.36□□□□□ -1.55
UBA52P62987 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
UBA52P62987 AL445383.1-201ENST00000554689 874 ntBASIC5.36□□□□□ -1.55
UBA52P62987 AC092718.4-201ENST00000566639 716 ntBASIC5.36□□□□□ -1.55
UBA52P62987 CTSLP2-201ENST00000580501 394 ntBASIC5.36□□□□□ -1.55
UBA52P62987 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.36□□□□□ -1.55
UBA52P62987 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.36□□□□□ -1.55
UBA52P62987 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.36□□□□□ -1.55
UBA52P62987 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.36□□□□□ -1.55
UBA52P62987 SMIM12P1-201ENST00000603004 274 ntBASIC5.36□□□□□ -1.55
UBA52P62987 AL157899.1-201ENST00000604110 936 ntBASIC5.36□□□□□ -1.55
UBA52P62987 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.36□□□□□ -1.55
UBA52P62987 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.36□□□□□ -1.55
UBA52P62987 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBA52P62987 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBA52P62987 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBA52P62987 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBA52P62987 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.36□□□□□ -1.55
UBA52P62987 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.36□□□□□ -1.55
UBA52P62987 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UBA52P62987 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
UBA52P62987 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
UBA52P62987 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
UBA52P62987 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBA52P62987 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.35□□□□□ -1.55
UBA52P62987 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.35□□□□□ -1.55
UBA52P62987 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
UBA52P62987 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBA52P62987 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.35□□□□□ -1.55
UBA52P62987 AC137056.2-201ENST00000624055 1958 ntBASIC5.35□□□□□ -1.55
UBA52P62987 RACGAP1P-201ENST00000550663 1879 ntBASIC5.35□□□□□ -1.55
UBA52P62987 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBA52P62987 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.35□□□□□ -1.55
UBA52P62987 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
UBA52P62987 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBA52P62987 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBA52P62987 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
UBA52P62987 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBA52P62987 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
UBA52P62987 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.35□□□□□ -1.55
UBA52P62987 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
UBA52P62987 RNA5SP435-201ENST00000364044 108 ntBASIC5.35□□□□□ -1.55
UBA52P62987 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBA52P62987 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
UBA52P62987 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
UBA52P62987 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.35□□□□□ -1.55
UBA52P62987 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.35□□□□□ -1.55
UBA52P62987 AC007562.1-201ENST00000421819 517 ntBASIC5.35□□□□□ -1.55
UBA52P62987 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
UBA52P62987 AC016027.5-201ENST00000427227 210 ntBASIC5.35□□□□□ -1.55
UBA52P62987 BX119904.3-201ENST00000428194 957 ntBASIC5.35□□□□□ -1.55
UBA52P62987 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.35□□□□□ -1.55
UBA52P62987 AC069154.1-201ENST00000432914 542 ntBASIC5.35□□□□□ -1.55
UBA52P62987 AC007679.3-201ENST00000434035 414 ntBASIC5.35□□□□□ -1.55
UBA52P62987 AC023274.2-201ENST00000445264 521 ntBASIC5.35□□□□□ -1.55
UBA52P62987 RN7SL221P-201ENST00000466190 281 ntBASIC5.35□□□□□ -1.55
UBA52P62987 NDUFA5P5-201ENST00000468361 342 ntBASIC5.35□□□□□ -1.55
UBA52P62987 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.35□□□□□ -1.55
UBA52P62987 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.35□□□□□ -1.55
UBA52P62987 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.35□□□□□ -1.55
UBA52P62987 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
UBA52P62987 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.35□□□□□ -1.55
UBA52P62987 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.35□□□□□ -1.55
UBA52P62987 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.35□□□□□ -1.55
UBA52P62987 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.35□□□□□ -1.55
UBA52P62987 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.35□□□□□ -1.55
UBA52P62987 RPL41P2-201ENST00000544920 409 ntBASIC5.35□□□□□ -1.55
UBA52P62987 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.35□□□□□ -1.55
UBA52P62987 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.35□□□□□ -1.55
UBA52P62987 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.35□□□□□ -1.55
UBA52P62987 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.35□□□□□ -1.55
UBA52P62987 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.35□□□□□ -1.55
UBA52P62987 SNORD96A-201ENST00000606577 79 ntBASIC5.35□□□□□ -1.55
UBA52P62987 AL135999.3-201ENST00000610501 812 ntBASIC5.35□□□□□ -1.55
UBA52P62987 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UBA52P62987 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms