Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.29□□□□□ -1.56
ACTBP60709 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.29□□□□□ -1.56
ACTBP60709 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
ACTBP60709 CASC19-260ENST00000641828 2001 ntBASIC5.29□□□□□ -1.56
ACTBP60709 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
ACTBP60709 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
ACTBP60709 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ACTBP60709 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ACTBP60709 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
ACTBP60709 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
ACTBP60709 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
ACTBP60709 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ACTBP60709 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ACTBP60709 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
ACTBP60709 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.28□□□□□ -1.56
ACTBP60709 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.28□□□□□ -1.56
ACTBP60709 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
ACTBP60709 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 MRRFP1-201ENST00000435941 1675 ntBASIC5.28□□□□□ -1.56
ACTBP60709 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ACTBP60709 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ACTBP60709 RN7SKP128-201ENST00000364270 303 ntBASIC5.28□□□□□ -1.56
ACTBP60709 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.28□□□□□ -1.56
ACTBP60709 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ACTBP60709 MRPS6P2-201ENST00000381143 370 ntBASIC5.28□□□□□ -1.56
ACTBP60709 AL353133.1-201ENST00000407695 401 ntBASIC5.28□□□□□ -1.56
ACTBP60709 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 CBX1P3-201ENST00000413296 527 ntBASIC5.28□□□□□ -1.56
ACTBP60709 RANP6-201ENST00000413691 644 ntBASIC5.28□□□□□ -1.56
ACTBP60709 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.28□□□□□ -1.56
ACTBP60709 AC009506.2-201ENST00000420635 840 ntBASIC5.28□□□□□ -1.56
ACTBP60709 CDC42P6-201ENST00000421246 576 ntBASIC5.28□□□□□ -1.56
ACTBP60709 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.28□□□□□ -1.56
ACTBP60709 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.28□□□□□ -1.56
ACTBP60709 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.28□□□□□ -1.56
ACTBP60709 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ACTBP60709 AL162739.1-201ENST00000450606 307 ntBASIC5.28□□□□□ -1.56
ACTBP60709 SEPT7P3-201ENST00000455017 621 ntBASIC5.28□□□□□ -1.56
ACTBP60709 RN7SL352P-201ENST00000466002 277 ntBASIC5.28□□□□□ -1.56
ACTBP60709 RPS3AP49-201ENST00000472161 790 ntBASIC5.28□□□□□ -1.56
ACTBP60709 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 AC091544.1-201ENST00000484702 348 ntBASIC5.28□□□□□ -1.56
ACTBP60709 AC009567.2-201ENST00000502989 349 ntBASIC5.28□□□□□ -1.56
ACTBP60709 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.28□□□□□ -1.56
ACTBP60709 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.28□□□□□ -1.56
ACTBP60709 RNU6-964P-201ENST00000516524 69 ntBASIC5.28□□□□□ -1.56
ACTBP60709 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.28□□□□□ -1.56
ACTBP60709 OR8Q1P-201ENST00000526467 655 ntBASIC5.28□□□□□ -1.56
ACTBP60709 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.28□□□□□ -1.56
ACTBP60709 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ACTBP60709 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.28□□□□□ -1.56
ACTBP60709 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ACTBP60709 AC009729.1-201ENST00000548873 1133 ntBASIC5.28□□□□□ -1.56
ACTBP60709 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.28□□□□□ -1.56
ACTBP60709 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.28□□□□□ -1.56
ACTBP60709 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.28□□□□□ -1.56
ACTBP60709 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.28□□□□□ -1.56
ACTBP60709 DYNLL1P1-201ENST00000595442 269 ntBASIC5.28□□□□□ -1.56
ACTBP60709 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.28□□□□□ -1.56
ACTBP60709 AC012175.1-201ENST00000603755 531 ntBASIC5.28□□□□□ -1.56
ACTBP60709 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.28□□□□□ -1.56
ACTBP60709 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ACTBP60709 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ACTBP60709 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ACTBP60709 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ACTBP60709 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTBP60709 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ACTBP60709 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
ACTBP60709 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 AC092451.3-201ENST00000625067 1343 ntBASIC5.27□□□□□ -1.57
ACTBP60709 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.27□□□□□ -1.57
ACTBP60709 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 AP005435.3-201ENST00000531260 3198 ntBASIC5.27□□□□□ -1.57
ACTBP60709 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 SMG1P5-202ENST00000529428 4219 ntBASIC5.27□□□□□ -1.57
ACTBP60709 SMG1P2-201ENST00000566127 4221 ntBASIC5.27□□□□□ -1.57
ACTBP60709 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
ACTBP60709 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
ACTBP60709 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 RNA5SP453-201ENST00000362503 119 ntBASIC5.27□□□□□ -1.57
ACTBP60709 RNA5SP140-201ENST00000364524 92 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms