Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.93□□□□□ -1.14
RIPK4P57078 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.93□□□□□ -1.14
RIPK4P57078 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RIPK4P57078 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RIPK4P57078 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.93□□□□□ -1.14
RIPK4P57078 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.93□□□□□ -1.14
RIPK4P57078 RBPJP7-201ENST00000442803 1447 ntBASIC7.93□□□□□ -1.14
RIPK4P57078 RBPJP5-201ENST00000449433 1447 ntBASIC7.93□□□□□ -1.14
RIPK4P57078 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
RIPK4P57078 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RIPK4P57078 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.93□□□□□ -1.14
RIPK4P57078 AC079753.1-201ENST00000623243 3868 ntBASIC7.93□□□□□ -1.14
RIPK4P57078 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RIPK4P57078 GNL2P1-201ENST00000451274 2190 ntBASIC7.93□□□□□ -1.14
RIPK4P57078 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.93□□□□□ -1.14
RIPK4P57078 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RIPK4P57078 AF287957.1-201ENST00000607368 1595 ntBASIC7.93□□□□□ -1.14
RIPK4P57078 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RIPK4P57078 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
RIPK4P57078 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
RIPK4P57078 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
RIPK4P57078 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RIPK4P57078 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.92□□□□□ -1.14
RIPK4P57078 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.92□□□□□ -1.14
RIPK4P57078 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RIPK4P57078 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.92□□□□□ -1.14
RIPK4P57078 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.92□□□□□ -1.14
RIPK4P57078 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RIPK4P57078 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC7.92□□□□□ -1.14
RIPK4P57078 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.92□□□□□ -1.14
RIPK4P57078 MIR1282-201ENST00000408865 101 ntBASIC7.92□□□□□ -1.14
RIPK4P57078 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RIPK4P57078 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.92□□□□□ -1.14
RIPK4P57078 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RIPK4P57078 EIF5AP4-201ENST00000441206 465 ntBASIC7.92□□□□□ -1.14
RIPK4P57078 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.92□□□□□ -1.14
RIPK4P57078 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
RIPK4P57078 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RIPK4P57078 AL359839.1-201ENST00000451975 1160 ntBASIC7.92□□□□□ -1.14
RIPK4P57078 RN7SL193P-201ENST00000491708 276 ntBASIC7.92□□□□□ -1.14
RIPK4P57078 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.92□□□□□ -1.14
RIPK4P57078 RNA5SP438-201ENST00000516561 112 ntBASIC7.92□□□□□ -1.14
RIPK4P57078 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
RIPK4P57078 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RIPK4P57078 AP003396.4-201ENST00000527574 265 ntBASIC7.92□□□□□ -1.14
RIPK4P57078 AC090651.1-201ENST00000567865 634 ntBASIC7.92□□□□□ -1.14
RIPK4P57078 AC067773.1-201ENST00000603284 1094 ntBASIC7.92□□□□□ -1.14
RIPK4P57078 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.92□□□□□ -1.14
RIPK4P57078 AL138960.1-201ENST00000613838 513 ntBASIC7.92□□□□□ -1.14
RIPK4P57078 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RIPK4P57078 MARK2P4-201ENST00000503381 2380 ntBASIC7.92□□□□□ -1.14
RIPK4P57078 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
RIPK4P57078 AC016583.1-201ENST00000624221 2431 ntBASIC7.92□□□□□ -1.14
RIPK4P57078 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
RIPK4P57078 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.92□□□□□ -1.14
RIPK4P57078 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.92□□□□□ -1.14
RIPK4P57078 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RIPK4P57078 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
RIPK4P57078 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
RIPK4P57078 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
RIPK4P57078 IMMTP1-201ENST00000435590 2219 ntBASIC7.91□□□□□ -1.14
RIPK4P57078 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RIPK4P57078 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RIPK4P57078 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
RIPK4P57078 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RIPK4P57078 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
RIPK4P57078 TMSB4XP2-201ENST00000335179 210 ntBASIC7.91□□□□□ -1.14
RIPK4P57078 OR10R3P-201ENST00000361688 942 ntBASIC7.91□□□□□ -1.14
RIPK4P57078 SNRPEP6-201ENST00000407465 277 ntBASIC7.91□□□□□ -1.14
RIPK4P57078 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.91□□□□□ -1.14
RIPK4P57078 HMGA1P8-201ENST00000414130 321 ntBASIC7.91□□□□□ -1.14
RIPK4P57078 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.91□□□□□ -1.14
RIPK4P57078 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.91□□□□□ -1.14
RIPK4P57078 RPS10P18-201ENST00000442662 495 ntBASIC7.91□□□□□ -1.14
RIPK4P57078 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.91□□□□□ -1.14
RIPK4P57078 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.91□□□□□ -1.14
RIPK4P57078 AC128716.1-201ENST00000475129 166 ntBASIC7.91□□□□□ -1.14
RIPK4P57078 AC092865.4-201ENST00000477936 615 ntBASIC7.91□□□□□ -1.14
RIPK4P57078 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.91□□□□□ -1.14
RIPK4P57078 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.91□□□□□ -1.14
RIPK4P57078 Y_RNA.667-201ENST00000516212 107 ntBASIC7.91□□□□□ -1.14
RIPK4P57078 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RIPK4P57078 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.91□□□□□ -1.14
RIPK4P57078 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.91□□□□□ -1.14
RIPK4P57078 AC110056.1-201ENST00000525759 911 ntBASIC7.91□□□□□ -1.14
RIPK4P57078 NANOGNBP2-201ENST00000544753 553 ntBASIC7.91□□□□□ -1.14
RIPK4P57078 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.91□□□□□ -1.14
RIPK4P57078 NDUFA5P11-201ENST00000567995 343 ntBASIC7.91□□□□□ -1.14
RIPK4P57078 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RIPK4P57078 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
RIPK4P57078 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.91□□□□□ -1.14
RIPK4P57078 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.91□□□□□ -1.14
RIPK4P57078 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.91□□□□□ -1.14
RIPK4P57078 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.91□□□□□ -1.14
RIPK4P57078 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RIPK4P57078 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.91□□□□□ -1.14
RIPK4P57078 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RIPK4P57078 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
RIPK4P57078 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RIPK4P57078 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms