Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.98□□□□□ -1.29
HMGCS2P54868 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HMGCS2P54868 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
HMGCS2P54868 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.98□□□□□ -1.29
HMGCS2P54868 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.98□□□□□ -1.29
HMGCS2P54868 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
HMGCS2P54868 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
HMGCS2P54868 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.97□□□□□ -1.29
HMGCS2P54868 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.97□□□□□ -1.29
HMGCS2P54868 HMGB1P20-201ENST00000402555 677 ntBASIC6.97□□□□□ -1.29
HMGCS2P54868 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.97□□□□□ -1.29
HMGCS2P54868 RPL36P18-201ENST00000419316 318 ntBASIC6.97□□□□□ -1.29
HMGCS2P54868 NMD3P2-201ENST00000421815 761 ntBASIC6.97□□□□□ -1.29
HMGCS2P54868 AC002504.1-201ENST00000438281 691 ntBASIC6.97□□□□□ -1.29
HMGCS2P54868 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.97□□□□□ -1.29
HMGCS2P54868 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.97□□□□□ -1.29
HMGCS2P54868 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.97□□□□□ -1.29
HMGCS2P54868 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.97□□□□□ -1.29
HMGCS2P54868 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HMGCS2P54868 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.97□□□□□ -1.29
HMGCS2P54868 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
HMGCS2P54868 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.96□□□□□ -1.29
HMGCS2P54868 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HMGCS2P54868 AL021877.2-201ENST00000624442 10684 ntBASIC6.96□□□□□ -1.29
HMGCS2P54868 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HMGCS2P54868 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.96□□□□□ -1.29
HMGCS2P54868 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGCS2P54868 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGCS2P54868 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGCS2P54868 RN7SKP160-201ENST00000363804 340 ntBASIC6.96□□□□□ -1.3
HMGCS2P54868 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HMGCS2P54868 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.96□□□□□ -1.3
HMGCS2P54868 RPS27AP3-201ENST00000453803 454 ntBASIC6.96□□□□□ -1.3
HMGCS2P54868 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.96□□□□□ -1.3
HMGCS2P54868 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.96□□□□□ -1.3
HMGCS2P54868 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.96□□□□□ -1.3
HMGCS2P54868 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.96□□□□□ -1.3
HMGCS2P54868 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.96□□□□□ -1.3
HMGCS2P54868 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.96□□□□□ -1.3
HMGCS2P54868 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.96□□□□□ -1.3
HMGCS2P54868 AC233699.1-201ENST00000569955 1168 ntBASIC6.96□□□□□ -1.3
HMGCS2P54868 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.96□□□□□ -1.3
HMGCS2P54868 AC020916.2-201ENST00000591242 360 ntBASIC6.96□□□□□ -1.3
HMGCS2P54868 OR7E18P-201ENST00000592589 702 ntBASIC6.96□□□□□ -1.3
HMGCS2P54868 MIR6719-201ENST00000622428 87 ntBASIC6.96□□□□□ -1.3
HMGCS2P54868 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
HMGCS2P54868 UGT2B27P-201ENST00000505092 1620 ntBASIC6.96□□□□□ -1.3
HMGCS2P54868 PARP4P1-201ENST00000435945 2337 ntBASIC6.96□□□□□ -1.3
HMGCS2P54868 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
HMGCS2P54868 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HMGCS2P54868 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGCS2P54868 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
HMGCS2P54868 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
HMGCS2P54868 AC011369.2-201ENST00000624423 1567 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HMGCS2P54868 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HMGCS2P54868 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.95□□□□□ -1.3
HMGCS2P54868 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMGCS2P54868 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HMGCS2P54868 SNORA64.1-201ENST00000362600 132 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 RNA5SP394-201ENST00000364216 119 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HMGCS2P54868 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HMGCS2P54868 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.95□□□□□ -1.3
HMGCS2P54868 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.95□□□□□ -1.3
HMGCS2P54868 MYO5BP2-201ENST00000449815 1277 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.95□□□□□ -1.3
HMGCS2P54868 RN7SL466P-201ENST00000497546 295 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 NENFP3-201ENST00000503735 313 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 AC109481.1-201ENST00000509173 282 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 AC074087.1-201ENST00000512059 724 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 IGLV3-30-201ENST00000524362 298 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 HMGN2P36-201ENST00000529541 409 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 OR6M2P-201ENST00000529831 871 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.95□□□□□ -1.3
HMGCS2P54868 MIR4505-201ENST00000582238 73 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 FO393422.1-201ENST00000603908 708 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 SDR42E1P1-201ENST00000611327 477 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms