Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.75□□□□□ -1.33
COPB1P53618 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.75□□□□□ -1.33
COPB1P53618 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COPB1P53618 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.75□□□□□ -1.33
COPB1P53618 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COPB1P53618 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COPB1P53618 ARSFP1-201ENST00000398758 477 ntBASIC6.75□□□□□ -1.33
COPB1P53618 AC003045.1-201ENST00000398779 713 ntBASIC6.75□□□□□ -1.33
COPB1P53618 AL121977.1-201ENST00000401636 979 ntBASIC6.75□□□□□ -1.33
COPB1P53618 MIR1266-201ENST00000408125 84 ntBASIC6.75□□□□□ -1.33
COPB1P53618 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.75□□□□□ -1.33
COPB1P53618 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.75□□□□□ -1.33
COPB1P53618 RPL24P2-201ENST00000421023 475 ntBASIC6.75□□□□□ -1.33
COPB1P53618 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.75□□□□□ -1.33
COPB1P53618 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
COPB1P53618 AP000949.1-201ENST00000438328 629 ntBASIC6.75□□□□□ -1.33
COPB1P53618 EMC3-AS1-205ENST00000438698 534 ntBASIC6.75□□□□□ -1.33
COPB1P53618 SOCS5P1-201ENST00000440415 949 ntBASIC6.75□□□□□ -1.33
COPB1P53618 AC064862.5-201ENST00000440618 334 ntBASIC6.75□□□□□ -1.33
COPB1P53618 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.75□□□□□ -1.33
COPB1P53618 RAB28P2-201ENST00000454299 641 ntBASIC6.75□□□□□ -1.33
COPB1P53618 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.75□□□□□ -1.33
COPB1P53618 RN7SL836P-201ENST00000476140 296 ntBASIC6.75□□□□□ -1.33
COPB1P53618 NPM1P28-201ENST00000492269 840 ntBASIC6.75□□□□□ -1.33
COPB1P53618 AGGF1P3-201ENST00000493675 1213 ntBASIC6.75□□□□□ -1.33
COPB1P53618 OR4D12P-201ENST00000509361 911 ntBASIC6.75□□□□□ -1.33
COPB1P53618 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COPB1P53618 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COPB1P53618 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.75□□□□□ -1.33
COPB1P53618 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.75□□□□□ -1.33
COPB1P53618 AC084851.2-201ENST00000530377 364 ntBASIC6.75□□□□□ -1.33
COPB1P53618 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC6.75□□□□□ -1.33
COPB1P53618 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.75□□□□□ -1.33
COPB1P53618 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.75□□□□□ -1.33
COPB1P53618 AL731537.2-201ENST00000561565 951 ntBASIC6.75□□□□□ -1.33
COPB1P53618 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.75□□□□□ -1.33
COPB1P53618 AC036176.3-201ENST00000602456 418 ntBASIC6.75□□□□□ -1.33
COPB1P53618 AC015849.6-201ENST00000605454 474 ntBASIC6.75□□□□□ -1.33
COPB1P53618 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.75□□□□□ -1.33
COPB1P53618 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.75□□□□□ -1.33
COPB1P53618 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
COPB1P53618 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COPB1P53618 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COPB1P53618 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COPB1P53618 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.75□□□□□ -1.33
COPB1P53618 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.75□□□□□ -1.33
COPB1P53618 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COPB1P53618 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
COPB1P53618 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.75□□□□□ -1.33
COPB1P53618 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COPB1P53618 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
COPB1P53618 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
COPB1P53618 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COPB1P53618 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COPB1P53618 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
COPB1P53618 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
COPB1P53618 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
COPB1P53618 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 AC024587.1-201ENST00000505925 2157 ntBASIC6.74□□□□□ -1.33
COPB1P53618 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
COPB1P53618 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COPB1P53618 RNU4-23P-201ENST00000362839 140 ntBASIC6.74□□□□□ -1.33
COPB1P53618 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COPB1P53618 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.74□□□□□ -1.33
COPB1P53618 UBTFL2-201ENST00000411859 1191 ntBASIC6.74□□□□□ -1.33
COPB1P53618 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.74□□□□□ -1.33
COPB1P53618 PTCD2P2-201ENST00000415579 1095 ntBASIC6.74□□□□□ -1.33
COPB1P53618 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.74□□□□□ -1.33
COPB1P53618 AC021876.1-201ENST00000425959 359 ntBASIC6.74□□□□□ -1.33
COPB1P53618 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.74□□□□□ -1.33
COPB1P53618 AC112492.2-201ENST00000432774 1030 ntBASIC6.74□□□□□ -1.33
COPB1P53618 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.74□□□□□ -1.33
COPB1P53618 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.74□□□□□ -1.33
COPB1P53618 PPIAP10-201ENST00000438675 458 ntBASIC6.74□□□□□ -1.33
COPB1P53618 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.74□□□□□ -1.33
COPB1P53618 XKRYP6-201ENST00000440468 1116 ntBASIC6.74□□□□□ -1.33
COPB1P53618 XKRYP3-201ENST00000442113 1116 ntBASIC6.74□□□□□ -1.33
COPB1P53618 RNA5SP206-201ENST00000516703 121 ntBASIC6.74□□□□□ -1.33
COPB1P53618 Y_RNA.710-201ENST00000516975 110 ntBASIC6.74□□□□□ -1.33
COPB1P53618 TPM3P3-201ENST00000521343 354 ntBASIC6.74□□□□□ -1.33
COPB1P53618 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.74□□□□□ -1.33
COPB1P53618 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.74□□□□□ -1.33
COPB1P53618 AC244502.2-201ENST00000543361 851 ntBASIC6.74□□□□□ -1.33
COPB1P53618 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.74□□□□□ -1.33
COPB1P53618 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.74□□□□□ -1.33
COPB1P53618 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.74□□□□□ -1.33
COPB1P53618 AP000919.1-201ENST00000582850 985 ntBASIC6.74□□□□□ -1.33
COPB1P53618 AC026898.1-201ENST00000586404 571 ntBASIC6.74□□□□□ -1.33
COPB1P53618 KATNBL1P1-201ENST00000605192 748 ntBASIC6.74□□□□□ -1.33
COPB1P53618 AC009779.8-202ENST00000607990 932 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms