Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CASP4P49662 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.57□□□□□ -1.36
CASP4P49662 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.57□□□□□ -1.36
CASP4P49662 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CASP4P49662 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.57□□□□□ -1.36
CASP4P49662 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CASP4P49662 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CASP4P49662 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.57□□□□□ -1.36
CASP4P49662 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.57□□□□□ -1.36
CASP4P49662 AC114876.1-201ENST00000490962 1366 ntBASIC6.57□□□□□ -1.36
CASP4P49662 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CASP4P49662 AC010329.1-201ENST00000593903 8328 ntBASIC6.56□□□□□ -1.36
CASP4P49662 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CASP4P49662 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CASP4P49662 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.56□□□□□ -1.36
CASP4P49662 ZNF658B-201ENST00000602828 3408 ntBASIC6.56□□□□□ -1.36
CASP4P49662 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
CASP4P49662 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.56□□□□□ -1.36
CASP4P49662 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.56□□□□□ -1.36
CASP4P49662 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CASP4P49662 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CASP4P49662 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CASP4P49662 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CASP4P49662 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CASP4P49662 AC107977.1-201ENST00000355745 939 ntBASIC6.56□□□□□ -1.36
CASP4P49662 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.56□□□□□ -1.36
CASP4P49662 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CASP4P49662 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.56□□□□□ -1.36
CASP4P49662 RPL23AP17-201ENST00000401064 499 ntBASIC6.56□□□□□ -1.36
CASP4P49662 RNU4-64P-201ENST00000410795 131 ntBASIC6.56□□□□□ -1.36
CASP4P49662 AC245096.1-201ENST00000413104 546 ntBASIC6.56□□□□□ -1.36
CASP4P49662 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.56□□□□□ -1.36
CASP4P49662 RPL12P12-201ENST00000424633 501 ntBASIC6.56□□□□□ -1.36
CASP4P49662 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.56□□□□□ -1.36
CASP4P49662 AC093166.3-201ENST00000448785 303 ntBASIC6.56□□□□□ -1.36
CASP4P49662 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.56□□□□□ -1.36
CASP4P49662 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.56□□□□□ -1.36
CASP4P49662 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.56□□□□□ -1.36
CASP4P49662 AC011853.1-201ENST00000518911 454 ntBASIC6.56□□□□□ -1.36
CASP4P49662 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.56□□□□□ -1.36
CASP4P49662 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.56□□□□□ -1.36
CASP4P49662 AC002519.2-203ENST00000567043 837 ntBASIC6.56□□□□□ -1.36
CASP4P49662 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.56□□□□□ -1.36
CASP4P49662 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CASP4P49662 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.56□□□□□ -1.36
CASP4P49662 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CASP4P49662 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.56□□□□□ -1.36
CASP4P49662 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.56□□□□□ -1.36
CASP4P49662 AC069234.4-201ENST00000621276 412 ntBASIC6.56□□□□□ -1.36
CASP4P49662 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.56□□□□□ -1.36
CASP4P49662 ZNF969P-201ENST00000510345 2341 ntBASIC6.56□□□□□ -1.36
CASP4P49662 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.56□□□□□ -1.36
CASP4P49662 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CASP4P49662 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CASP4P49662 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CASP4P49662 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CASP4P49662 MTCO1P28-201ENST00000574177 1528 ntBASIC6.55□□□□□ -1.36
CASP4P49662 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.55□□□□□ -1.36
CASP4P49662 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.55□□□□□ -1.36
CASP4P49662 AC104966.1-201ENST00000467010 1464 ntBASIC6.55□□□□□ -1.36
CASP4P49662 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CASP4P49662 RNU1-59P-201ENST00000364829 162 ntBASIC6.55□□□□□ -1.36
CASP4P49662 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CASP4P49662 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.55□□□□□ -1.36
CASP4P49662 RPL35AP3-201ENST00000414680 288 ntBASIC6.55□□□□□ -1.36
CASP4P49662 NMD3P2-201ENST00000421815 761 ntBASIC6.55□□□□□ -1.36
CASP4P49662 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.55□□□□□ -1.36
CASP4P49662 AL365220.1-201ENST00000432923 399 ntBASIC6.55□□□□□ -1.36
CASP4P49662 AC007679.3-201ENST00000434035 414 ntBASIC6.55□□□□□ -1.36
CASP4P49662 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CASP4P49662 CUBNP2-201ENST00000443534 1139 ntBASIC6.55□□□□□ -1.36
CASP4P49662 AC097463.1-201ENST00000447288 481 ntBASIC6.55□□□□□ -1.36
CASP4P49662 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.55□□□□□ -1.36
CASP4P49662 RN7SKP248-201ENST00000516278 305 ntBASIC6.55□□□□□ -1.36
CASP4P49662 RN7SKP238-201ENST00000516483 249 ntBASIC6.55□□□□□ -1.36
CASP4P49662 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CASP4P49662 OR7E158P-201ENST00000524483 910 ntBASIC6.55□□□□□ -1.36
CASP4P49662 OR56A7P-201ENST00000524865 941 ntBASIC6.55□□□□□ -1.36
CASP4P49662 AC024405.1-201ENST00000532521 1042 ntBASIC6.55□□□□□ -1.36
CASP4P49662 AC006512.2-201ENST00000543250 486 ntBASIC6.55□□□□□ -1.36
CASP4P49662 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.55□□□□□ -1.36
CASP4P49662 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.55□□□□□ -1.36
CASP4P49662 AC092332.1-201ENST00000563684 829 ntBASIC6.55□□□□□ -1.36
CASP4P49662 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.55□□□□□ -1.36
CASP4P49662 AP005119.1-201ENST00000580956 292 ntBASIC6.55□□□□□ -1.36
CASP4P49662 U1.25-201ENST00000614085 162 ntBASIC6.55□□□□□ -1.36
CASP4P49662 U1.34-201ENST00000618578 162 ntBASIC6.55□□□□□ -1.36
CASP4P49662 U1.31-201ENST00000620022 160 ntBASIC6.55□□□□□ -1.36
CASP4P49662 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.55□□□□□ -1.36
CASP4P49662 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CASP4P49662 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.55□□□□□ -1.36
CASP4P49662 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CASP4P49662 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CASP4P49662 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.55□□□□□ -1.36
CASP4P49662 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CASP4P49662 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CASP4P49662 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CASP4P49662 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.55□□□□□ -1.36
CASP4P49662 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.55□□□□□ -1.36
CASP4P49662 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms