Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.15□□□□□ -1.59
COL8A2P25067 AC108673.3-201ENST00000609183 335 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 AC129778.1-202ENST00000623812 261 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 AC018659.2-201ENST00000624690 715 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 SNX18P12-201ENST00000624821 759 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.15□□□□□ -1.59
COL8A2P25067 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.15□□□□□ -1.59
COL8A2P25067 AL591379.1-207ENST00000635982 261 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.15□□□□□ -1.59
COL8A2P25067 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.15□□□□□ -1.59
COL8A2P25067 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
COL8A2P25067 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL8A2P25067 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL8A2P25067 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
COL8A2P25067 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL8A2P25067 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL8A2P25067 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL8A2P25067 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL8A2P25067 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL8A2P25067 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL8A2P25067 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
COL8A2P25067 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL8A2P25067 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.14□□□□□ -1.59
COL8A2P25067 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL8A2P25067 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.14□□□□□ -1.59
COL8A2P25067 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.14□□□□□ -1.59
COL8A2P25067 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL8A2P25067 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
COL8A2P25067 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.14□□□□□ -1.59
COL8A2P25067 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.14□□□□□ -1.59
COL8A2P25067 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL8A2P25067 TMSB4XP2-201ENST00000335179 210 ntBASIC5.14□□□□□ -1.59
COL8A2P25067 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.14□□□□□ -1.59
COL8A2P25067 OR7E25P-201ENST00000344844 931 ntBASIC5.14□□□□□ -1.59
COL8A2P25067 RN7SKP269-201ENST00000365545 319 ntBASIC5.14□□□□□ -1.59
COL8A2P25067 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.14□□□□□ -1.59
COL8A2P25067 RPL12P12-201ENST00000424633 501 ntBASIC5.14□□□□□ -1.59
COL8A2P25067 OR13K1P-201ENST00000444577 975 ntBASIC5.14□□□□□ -1.59
COL8A2P25067 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL8A2P25067 CFL1P4-201ENST00000451536 498 ntBASIC5.14□□□□□ -1.59
COL8A2P25067 HLA-DPA3-207ENST00000454398 229 ntBASIC5.14□□□□□ -1.59
COL8A2P25067 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL8A2P25067 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.14□□□□□ -1.59
COL8A2P25067 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.14□□□□□ -1.59
COL8A2P25067 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.14□□□□□ -1.59
COL8A2P25067 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.14□□□□□ -1.59
COL8A2P25067 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COL8A2P25067 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.14□□□□□ -1.59
COL8A2P25067 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.14□□□□□ -1.59
COL8A2P25067 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.14□□□□□ -1.59
COL8A2P25067 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.14□□□□□ -1.59
COL8A2P25067 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.14□□□□□ -1.59
COL8A2P25067 AC096861.1-201ENST00000616652 240 ntBASIC5.14□□□□□ -1.59
COL8A2P25067 TCL6_3.1-201ENST00000619064 137 ntBASIC5.14□□□□□ -1.59
COL8A2P25067 AL136228.1-201ENST00000622221 319 ntBASIC5.14□□□□□ -1.59
COL8A2P25067 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.14□□□□□ -1.59
COL8A2P25067 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.14□□□□□ -1.59
COL8A2P25067 AC129915.3-201ENST00000634128 948 ntBASIC5.14□□□□□ -1.59
COL8A2P25067 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COL8A2P25067 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
COL8A2P25067 HDAC1P2-201ENST00000453661 1398 ntBASIC5.14□□□□□ -1.59
COL8A2P25067 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COL8A2P25067 AC110373.1-201ENST00000505994 3505 ntBASIC5.14□□□□□ -1.59
COL8A2P25067 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL8A2P25067 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.14□□□□□ -1.59
COL8A2P25067 IMMTP1-201ENST00000435590 2219 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 AP002833.3-201ENST00000625075 2265 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 AC096921.2-201ENST00000561507 1916 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL8A2P25067 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
COL8A2P25067 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL8A2P25067 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL8A2P25067 AF287957.1-201ENST00000607368 1595 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL8A2P25067 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.13□□□□□ -1.59
COL8A2P25067 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL8A2P25067 HSPD1P8-201ENST00000400121 1658 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL8A2P25067 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.13□□□□□ -1.59
COL8A2P25067 AC023490.2-201ENST00000359859 470 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL8A2P25067 RNU4-64P-201ENST00000410795 131 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.13□□□□□ -1.59
COL8A2P25067 RPS3P2-201ENST00000421346 701 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.13□□□□□ -1.59
COL8A2P25067 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.13□□□□□ -1.59
COL8A2P25067 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.13□□□□□ -1.59
COL8A2P25067 TRIM60P16-201ENST00000444048 694 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.13□□□□□ -1.59
COL8A2P25067 ACA64.1-201ENST00000459171 127 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 AC084754.1-201ENST00000463466 464 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 RN7SL221P-201ENST00000466190 281 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 RN7SL193P-201ENST00000491708 276 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 AC114781.3-201ENST00000512083 142 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 Y_RNA.667-201ENST00000516212 107 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.13□□□□□ -1.59
COL8A2P25067 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.13□□□□□ -1.59
COL8A2P25067 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms