Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
COL5A1P20908 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COL5A1P20908 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.79□□□□□ -1.48
COL5A1P20908 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A1P20908 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A1P20908 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
COL5A1P20908 AC104162.1-201ENST00000430831 2382 ntBASIC5.79□□□□□ -1.48
COL5A1P20908 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A1P20908 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A1P20908 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
COL5A1P20908 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.79□□□□□ -1.48
COL5A1P20908 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A1P20908 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
COL5A1P20908 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A1P20908 AC008957.3-201ENST00000624112 2242 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 RNU4-34P-201ENST00000410431 124 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A1P20908 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.78□□□□□ -1.48
COL5A1P20908 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A1P20908 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A1P20908 RN7SL727P-201ENST00000482164 296 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 OR7E157P-201ENST00000494376 911 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AC108693.1-201ENST00000496068 432 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.78□□□□□ -1.48
COL5A1P20908 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.78□□□□□ -1.48
COL5A1P20908 IGBP1P1-201ENST00000554337 1009 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A1P20908 MIR4505-201ENST00000582238 73 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A1P20908 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A1P20908 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.78□□□□□ -1.48
COL5A1P20908 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A1P20908 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A1P20908 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A1P20908 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.78□□□□□ -1.48
COL5A1P20908 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.78□□□□□ -1.48
COL5A1P20908 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A1P20908 C4BPAP1-201ENST00000415474 1893 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 CCNT2P1-201ENST00000423082 1315 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.78□□□□□ -1.48
COL5A1P20908 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A1P20908 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
COL5A1P20908 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A1P20908 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.78□□□□□ -1.48
COL5A1P20908 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.78□□□□□ -1.48
COL5A1P20908 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A1P20908 RNA5SP394-201ENST00000364216 119 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 RN7SKP59-201ENST00000410520 314 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 RN7SKP166-201ENST00000410812 305 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A1P20908 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.78□□□□□ -1.48
COL5A1P20908 AL022331.1-201ENST00000429025 477 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A1P20908 AL445928.1-201ENST00000435545 222 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 FMO7P-201ENST00000436045 768 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 Z84478.1-201ENST00000438230 1219 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A1P20908 AC092967.1-201ENST00000449016 481 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AC073850.1-201ENST00000449243 255 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 LRRC37A14P-201ENST00000452297 462 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AC091685.2-201ENST00000454924 864 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A1P20908 AC007386.1-201ENST00000455212 582 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AC093166.4-201ENST00000457867 318 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AL133445.1-201ENST00000467051 452 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 RN7SL466P-201ENST00000497546 295 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 OR5M14P-201ENST00000506803 618 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A1P20908 AC074087.1-201ENST00000512059 724 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 RNU6-615P-201ENST00000516065 106 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A1P20908 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A1P20908 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A1P20908 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A1P20908 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.78□□□□□ -1.48
COL5A1P20908 AL035661.1-201ENST00000620459 1144 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AP001885.1-201ENST00000621658 558 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 MIR6810-201ENST00000622701 70 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.78□□□□□ -1.48
COL5A1P20908 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.78□□□□□ -1.48
COL5A1P20908 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A1P20908 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC5.78□□□□□ -1.48
COL5A1P20908 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.78□□□□□ -1.48
COL5A1P20908 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
COL5A1P20908 AC006511.3-201ENST00000624929 1783 ntBASIC5.78□□□□□ -1.48
COL5A1P20908 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
COL5A1P20908 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
COL5A1P20908 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
COL5A1P20908 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
COL5A1P20908 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL5A1P20908 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL5A1P20908 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL5A1P20908 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC5.77□□□□□ -1.49
COL5A1P20908 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL5A1P20908 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
COL5A1P20908 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL5A1P20908 AP003170.5-201ENST00000397185 335 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 CUBNP2-201ENST00000443534 1139 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 OR13K1P-201ENST00000444577 975 ntBASIC5.77□□□□□ -1.49
COL5A1P20908 AC023818.1-201ENST00000498379 384 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms