Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC2.55□□□□□ -2
USH2AO75445 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.55□□□□□ -2
USH2AO75445 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC2.55□□□□□ -2
USH2AO75445 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 MAPKBP1-201ENST00000456763 7158 ntTSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC2.55□□□□□ -2
USH2AO75445 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 AC005294.1-201ENST00000355509 281 ntBASIC2.55□□□□□ -2
USH2AO75445 HIST1H3PS1-201ENST00000404612 417 ntBASIC2.55□□□□□ -2
USH2AO75445 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.55□□□□□ -2
USH2AO75445 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC2.55□□□□□ -2
USH2AO75445 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 RPS27AP3-201ENST00000453803 454 ntBASIC2.55□□□□□ -2
USH2AO75445 AC087672.1-201ENST00000479876 766 ntBASIC2.55□□□□□ -2
USH2AO75445 AC006427.1-201ENST00000514359 712 ntBASIC2.55□□□□□ -2
USH2AO75445 OR4A6P-201ENST00000534364 970 ntBASIC2.55□□□□□ -2
USH2AO75445 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.55□□□□□ -2
USH2AO75445 GTF2IP6-201ENST00000583143 541 ntBASIC2.55□□□□□ -2
USH2AO75445 AL953862.2-201ENST00000603089 820 ntBASIC2.55□□□□□ -2
USH2AO75445 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
USH2AO75445 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
USH2AO75445 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC2.54□□□□□ -2
USH2AO75445 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
USH2AO75445 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
USH2AO75445 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 ZNF587-201ENST00000339656 6882 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC2.54□□□□□ -2
USH2AO75445 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
USH2AO75445 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
USH2AO75445 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 EEF1A1P24-201ENST00000451469 1378 ntBASIC2.54□□□□□ -2
USH2AO75445 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC2.54□□□□□ -2
USH2AO75445 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 OR10R3P-201ENST00000361688 942 ntBASIC2.54□□□□□ -2
USH2AO75445 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC2.54□□□□□ -2
USH2AO75445 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC2.54□□□□□ -2
USH2AO75445 CUBNP2-201ENST00000443534 1139 ntBASIC2.54□□□□□ -2
USH2AO75445 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC2.54□□□□□ -2
USH2AO75445 AC004980.4-201ENST00000513375 203 ntBASIC2.54□□□□□ -2
USH2AO75445 OR5AN2P-201ENST00000534535 896 ntBASIC2.54□□□□□ -2
USH2AO75445 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC2.54□□□□□ -2
USH2AO75445 NPM1P42-201ENST00000560329 862 ntBASIC2.54□□□□□ -2
USH2AO75445 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC2.54□□□□□ -2
USH2AO75445 AC009120.3-201ENST00000563335 499 ntBASIC2.54□□□□□ -2
USH2AO75445 AC011477.5-201ENST00000586571 259 ntBASIC2.54□□□□□ -2
USH2AO75445 AC067959.1-201ENST00000604334 379 ntBASIC2.54□□□□□ -2
USH2AO75445 AC112200.1-201ENST00000625015 234 ntBASIC2.54□□□□□ -2
USH2AO75445 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
USH2AO75445 AC092821.3-202ENST00000641304 2767 ntBASIC2.54□□□□□ -2
USH2AO75445 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC2.54□□□□□ -2
USH2AO75445 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
USH2AO75445 SELE-204ENST00000367776 3576 ntTSL 5 BASIC2.54□□□□□ -2
USH2AO75445 SELE-205ENST00000367777 3576 ntTSL 5 BASIC2.54□□□□□ -2
USH2AO75445 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
USH2AO75445 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC2.54□□□□□ -2
USH2AO75445 CARF-208ENST00000428585 2513 ntTSL 2 BASIC2.54□□□□□ -2
USH2AO75445 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC2.54□□□□□ -2
USH2AO75445 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC2.54□□□□□ -2
USH2AO75445 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 PPIP5K1-206ENST00000381885 5596 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
USH2AO75445 ZSCAN29-202ENST00000396976 5595 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 RNA5SP211-201ENST00000365516 117 ntBASIC2.54□□□□□ -2
USH2AO75445 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC2.54□□□□□ -2
USH2AO75445 AC006335.2-201ENST00000437993 330 ntBASIC2.54□□□□□ -2
USH2AO75445 RPL23AP72-201ENST00000492447 435 ntBASIC2.54□□□□□ -2
USH2AO75445 AC111000.3-201ENST00000508057 576 ntBASIC2.54□□□□□ -2
USH2AO75445 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC2.54□□□□□ -2
USH2AO75445 MED28P5-201ENST00000528254 438 ntBASIC2.54□□□□□ -2
USH2AO75445 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
USH2AO75445 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC2.54□□□□□ -2
USH2AO75445 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC2.54□□□□□ -2
USH2AO75445 PFKM-232ENST00000629846 381 ntTSL 4 BASIC2.54□□□□□ -2
USH2AO75445 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC2.54□□□□□ -2
USH2AO75445 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USH2AO75445 AL121768.1-201ENST00000613917 2544 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms