Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC005034.3-201ENST00000604845 1747 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 COX6B1P3-201ENST00000312310 260 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 RNA5SP122-201ENST00000384457 108 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC004386.1-201ENST00000393214 761 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AL389925.1-201ENST00000432257 728 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 IGLV3-4-201ENST00000432300 244 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 BTG3P1-201ENST00000435859 716 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 SOCS5P1-201ENST00000440415 949 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC016724.1-201ENST00000453215 421 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 SNX18P26-201ENST00000458433 740 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 RPL12P31-201ENST00000478433 450 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC233702.7-202ENST00000582941 211 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AL031658.2-201ENST00000616850 651 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 LYARP1-201ENST00000436977 1501 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AC093225.1-201ENST00000506867 1408 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 CDY11P-201ENST00000447168 1651 ntBASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA2E9PIF3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.71□□□□□ -1.49
NPIPA2E9PIF3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.71□□□□□ -1.49
NPIPA2E9PIF3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPIPA2E9PIF3 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
NPIPA2E9PIF3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPIPA2E9PIF3 AC008957.3-201ENST00000624112 2242 ntBASIC5.71□□□□□ -1.49
NPIPA2E9PIF3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NPIPA2E9PIF3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPIPA2E9PIF3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NPIPA2E9PIF3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPIPA2E9PIF3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 RNA5SP478-201ENST00000364657 115 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 RN7SKP15-201ENST00000364742 309 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 OR2W4P-201ENST00000406496 926 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 RN7SKP144-201ENST00000411108 279 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 DPPA2P2-201ENST00000418220 897 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 RPL6P30-201ENST00000443382 862 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 AL133351.3-201ENST00000454998 193 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 RNU7-157P-201ENST00000459600 66 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 AC068228.1-201ENST00000461723 211 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 AC094085.1-201ENST00000468914 584 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 AC090568.1-201ENST00000509499 856 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 KHDC1P1-201ENST00000511053 508 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 IGHV4-55-201ENST00000520889 368 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 AC005332.4-201ENST00000592752 579 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 AP001437.1-201ENST00000608783 456 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 TCL6_3.1-201ENST00000619064 137 ntBASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA2E9PIF3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms