Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 AC125238.2-201ENST00000430003 1440 ntBASIC6.93□□□□□ -1.3
SSX2IPQ9Y2D8 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AC093278.2-201ENST00000564956 2485 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 BRD7P1-201ENST00000557705 1915 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AP005139.1-201ENST00000580702 1647 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AL035422.1-201ENST00000414193 397 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 TRGV7-201ENST00000427089 353 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 Z68868.1-201ENST00000429048 544 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 RPSAP65-201ENST00000429660 595 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 EIF5AP4-201ENST00000441206 465 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AL645936.1-201ENST00000441979 518 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 HMGN1P8-201ENST00000463578 288 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AC092905.1-201ENST00000467527 949 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 SNX18P25-201ENST00000510539 758 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 KHDC1P1-201ENST00000511053 508 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 ZNF519P4-201ENST00000514008 125 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 IGKV2-4-201ENST00000523070 340 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AC004232.2-201ENST00000574245 821 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AC022387.2-201ENST00000604050 448 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AL356986.1-201ENST00000604085 341 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AC015982.1-201ENST00000608113 465 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AC018692.2-201ENST00000624130 348 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 TTC41P-205ENST00000551270 3963 ntBASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSX2IPQ9Y2D8 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 AC022034.1-201ENST00000512867 2156 ntBASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 OR7E25P-201ENST00000344844 931 ntBASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 RNA5SP435-201ENST00000364044 108 ntBASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 AL354707.3-201ENST00000427308 331 ntBASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 AC010240.2-201ENST00000445363 1205 ntBASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 CYCSP53-201ENST00000455540 265 ntBASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 RN7SL221P-201ENST00000466190 281 ntBASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 RPL5P14-201ENST00000494197 878 ntBASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 UGT2A3P7-201ENST00000510485 734 ntBASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 HNRNPRP2-201ENST00000528421 743 ntBASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 AP001437.1-201ENST00000608783 456 ntBASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms