Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SELE-202ENST00000367774 1518 ntTSL 5 BASIC10.1□□□□□ -0.79
RTN4Q9NQC3 PPP1R11-203ENST00000376765 1536 ntTSL 3 BASIC10.1□□□□□ -0.79
RTN4Q9NQC3 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RTN4Q9NQC3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
RTN4Q9NQC3 HDAC9-229ENST00000622668 4279 ntTSL 2 BASIC10.1□□□□□ -0.79
RTN4Q9NQC3 NFYC-211ENST00000427410 1379 ntTSL 2 BASIC10.1□□□□□ -0.79
RTN4Q9NQC3 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
RTN4Q9NQC3 AC020633.1-201ENST00000468439 2247 ntBASIC10.1□□□□□ -0.79
RTN4Q9NQC3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
RTN4Q9NQC3 DDX52-213ENST00000617633 6362 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RTN4Q9NQC3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
RTN4Q9NQC3 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RTN4Q9NQC3 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC10.1□□□□□ -0.79
RTN4Q9NQC3 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 DRAIC-201ENST00000498938 1345 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 TFDP2-209ENST00000477292 1403 ntTSL 2 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 NLRP3P1-201ENST00000622303 1785 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 SMUG1-201ENST00000243112 627 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 TNFAIP8-201ENST00000274456 795 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 RNU6-797P-201ENST00000363101 109 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 SNORA5C-201ENST00000364902 137 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 MCF2L-206ENST00000397021 576 ntTSL 2 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 TPMTP2-201ENST00000414372 726 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 PIGFP2-201ENST00000421400 651 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 PTMAP4-201ENST00000426188 346 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AL035411.1-201ENST00000427762 690 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 FTLP19-201ENST00000433300 394 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 RPL7P11-201ENST00000437586 658 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC068279.1-201ENST00000444323 888 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 C11orf98P1-201ENST00000446114 318 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 ST13P18-201ENST00000456632 1027 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC139451.1-201ENST00000463176 330 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 ACPP-203ENST00000475741 1242 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC092989.1-201ENST00000481235 277 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 ACA64.6-201ENST00000516310 117 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 HAVCR2-204ENST00000522593 975 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 ARL6IP1P3-201ENST00000524544 560 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 OR5AQ1P-201ENST00000527596 927 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AP002986.1-202ENST00000532116 669 ntTSL 3 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC112694.1-201ENST00000541939 570 ntTSL 4 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 RAD52-218ENST00000545564 681 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 LINC02396-203ENST00000551922 525 ntTSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC012317.1-201ENST00000563611 534 ntTSL 4 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 HCCAT5-201ENST00000569990 1079 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 RN7SL783P-201ENST00000577950 301 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC020917.2-201ENST00000587343 401 ntTSL 3 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC009955.2-201ENST00000597288 542 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 RPS16-204ENST00000599539 555 ntTSL 2 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 MEMO1P5-201ENST00000604810 406 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC012594.1-253ENST00000609532 846 ntTSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC012594.1-214ENST00000630496 858 ntTSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AC078776.2-201ENST00000641021 285 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 EEF1A1P19-201ENST00000513637 1382 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 RBMS1-204ENST00000409289 1490 ntTSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 AP005432.1-201ENST00000580891 3485 ntBASIC10.09□□□□□ -0.79
RTN4Q9NQC3 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC10.09□□□□□ -0.79
RTN4Q9NQC3 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 PCDH15-223ENST00000495484 1896 ntTSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 FIGNL1-211ENST00000611938 3543 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTN4Q9NQC3 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms