Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 MAPK10-383ENST00000642032 3390 ntBASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SEC61A2Q9H9S3 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC122713.2-201ENST00000624942 3335 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 WBP11P1-201ENST00000562560 1931 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC023886.2-201ENST00000321285 411 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 RN7SKP257-201ENST00000364525 309 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 RNA5SP302-201ENST00000364896 100 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 RNA5SP172-201ENST00000365061 118 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 SNORA70.5-201ENST00000365519 135 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 FAUP2-201ENST00000394301 401 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AL049697.3-201ENST00000406493 982 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 Y_RNA.604-201ENST00000410574 102 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 MTCO1P45-201ENST00000431457 267 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC090018.1-201ENST00000434369 367 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 ANXA2P2-201ENST00000435128 1020 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 HMGN1P6-201ENST00000438508 291 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 ARL5AP3-201ENST00000439327 386 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC027124.1-201ENST00000440852 466 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 NPM1P49-201ENST00000448027 714 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 RPL36AP55-201ENST00000454114 305 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 RPS4XP19-201ENST00000460237 736 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 RN7SL306P-201ENST00000492941 296 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC091860.1-201ENST00000505723 432 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 NACAP6-201ENST00000509572 622 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC093755.1-201ENST00000512950 1023 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 BUD31P1-201ENST00000521828 359 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC107952.1-201ENST00000524200 376 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 MTND2P26-201ENST00000528255 1029 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 MTCO2P15-201ENST00000532655 656 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC092865.1-201ENST00000544395 1023 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC024909.2-201ENST00000553035 286 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC090971.3-201ENST00000557871 1041 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 RN7SL131P-201ENST00000579043 256 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 DHFRP1-201ENST00000579682 559 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 NTAN1P1-201ENST00000603150 646 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC095055.1-201ENST00000603472 1113 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC005034.4-201ENST00000603612 899 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC079880.2-201ENST00000603790 1213 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AL513218.1-201ENST00000606527 391 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AC092354.2-201ENST00000607786 514 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 AL356361.1-201ENST00000400943 1459 ntBASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC6.25□□□□□ -1.41
SEC61A2Q9H9S3 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms