Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM4Q9C037 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.34□□□□□ -1.39
TRIM4Q9C037 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM4Q9C037 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TRIM4Q9C037 DLEU2L-201ENST00000371086 3555 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 AP000473.2-201ENST00000602659 1537 ntBASIC6.34□□□□□ -1.39
TRIM4Q9C037 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
TRIM4Q9C037 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.34□□□□□ -1.4
TRIM4Q9C037 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.34□□□□□ -1.4
TRIM4Q9C037 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
TRIM4Q9C037 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 AC090220.1-201ENST00000593078 1699 ntBASIC6.33□□□□□ -1.4
TRIM4Q9C037 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 YWHAZP4-201ENST00000392459 708 ntBASIC6.33□□□□□ -1.4
TRIM4Q9C037 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 AL139156.3-201ENST00000454802 394 ntBASIC6.33□□□□□ -1.4
TRIM4Q9C037 RPS26P11-201ENST00000463445 348 ntBASIC6.33□□□□□ -1.4
TRIM4Q9C037 RPS26P6-201ENST00000475156 348 ntBASIC6.33□□□□□ -1.4
TRIM4Q9C037 RN7SL413P-201ENST00000482700 297 ntBASIC6.33□□□□□ -1.4
TRIM4Q9C037 RN7SL362P-201ENST00000494228 267 ntBASIC6.33□□□□□ -1.4
TRIM4Q9C037 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 COX6B1P4-201ENST00000519826 484 ntBASIC6.33□□□□□ -1.4
TRIM4Q9C037 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 AC124891.1-201ENST00000536322 519 ntBASIC6.33□□□□□ -1.4
TRIM4Q9C037 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 AL590032.1-201ENST00000604920 252 ntBASIC6.33□□□□□ -1.4
TRIM4Q9C037 AC097467.4-201ENST00000605504 141 ntBASIC6.33□□□□□ -1.4
TRIM4Q9C037 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 AC005393.1-201ENST00000617916 584 ntBASIC6.33□□□□□ -1.4
TRIM4Q9C037 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 ZNF101P1-201ENST00000435701 1720 ntBASIC6.33□□□□□ -1.4
TRIM4Q9C037 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TRIM4Q9C037 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM4Q9C037 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.32□□□□□ -1.4
TRIM4Q9C037 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM4Q9C037 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM4Q9C037 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM4Q9C037 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM4Q9C037 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM4Q9C037 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM4Q9C037 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 GNG5P2-201ENST00000372054 207 ntBASIC6.32□□□□□ -1.4
TRIM4Q9C037 AL512422.1-201ENST00000407033 553 ntBASIC6.32□□□□□ -1.4
TRIM4Q9C037 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 VN1R20P-201ENST00000425215 966 ntBASIC6.32□□□□□ -1.4
TRIM4Q9C037 AC239367.3-201ENST00000428996 814 ntBASIC6.32□□□□□ -1.4
TRIM4Q9C037 AL590128.1-201ENST00000433407 286 ntBASIC6.32□□□□□ -1.4
TRIM4Q9C037 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM4Q9C037 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 AC023968.1-201ENST00000560719 475 ntBASIC6.32□□□□□ -1.4
TRIM4Q9C037 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 AC106785.4-201ENST00000569492 412 ntBASIC6.32□□□□□ -1.4
TRIM4Q9C037 RN7SL404P-201ENST00000582421 281 ntBASIC6.32□□□□□ -1.4
TRIM4Q9C037 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM4Q9C037 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms