Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.78□□□□□ -1.16
ABCA3Q99758 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.78□□□□□ -1.16
ABCA3Q99758 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.78□□□□□ -1.16
ABCA3Q99758 AP000550.3-201ENST00000637734 379 ntBASIC7.78□□□□□ -1.16
ABCA3Q99758 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ABCA3Q99758 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
ABCA3Q99758 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
ABCA3Q99758 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ABCA3Q99758 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ABCA3Q99758 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ABCA3Q99758 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
ABCA3Q99758 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.78□□□□□ -1.16
ABCA3Q99758 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
ABCA3Q99758 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.78□□□□□ -1.16
ABCA3Q99758 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.78□□□□□ -1.16
ABCA3Q99758 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ABCA3Q99758 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
ABCA3Q99758 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
ABCA3Q99758 LRRC37A6P-202ENST00000448648 5444 ntBASIC7.78□□□□□ -1.16
ABCA3Q99758 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
ABCA3Q99758 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.78□□□□□ -1.16
ABCA3Q99758 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.78□□□□□ -1.16
ABCA3Q99758 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
ABCA3Q99758 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ABCA3Q99758 RN7SKP213-201ENST00000410746 298 ntBASIC7.78□□□□□ -1.16
ABCA3Q99758 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.78□□□□□ -1.16
ABCA3Q99758 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.78□□□□□ -1.16
ABCA3Q99758 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.78□□□□□ -1.16
ABCA3Q99758 PGAM1P13-201ENST00000507497 754 ntBASIC7.78□□□□□ -1.16
ABCA3Q99758 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.78□□□□□ -1.16
ABCA3Q99758 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.78□□□□□ -1.16
ABCA3Q99758 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.78□□□□□ -1.16
ABCA3Q99758 AC000068.2-201ENST00000608816 460 ntBASIC7.78□□□□□ -1.16
ABCA3Q99758 MROH3P-201ENST00000435735 2676 ntBASIC7.78□□□□□ -1.16
ABCA3Q99758 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
ABCA3Q99758 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
ABCA3Q99758 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
ABCA3Q99758 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
ABCA3Q99758 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
ABCA3Q99758 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
ABCA3Q99758 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
ABCA3Q99758 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ABCA3Q99758 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
ABCA3Q99758 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.77□□□□□ -1.17
ABCA3Q99758 ZNF658B-201ENST00000602828 3408 ntBASIC7.77□□□□□ -1.17
ABCA3Q99758 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ABCA3Q99758 AC112255.1-201ENST00000624070 2493 ntBASIC7.77□□□□□ -1.17
ABCA3Q99758 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ABCA3Q99758 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.77□□□□□ -1.17
ABCA3Q99758 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ABCA3Q99758 MFSD8-216ENST00000641147 4009 ntBASIC7.77□□□□□ -1.17
ABCA3Q99758 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ABCA3Q99758 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ABCA3Q99758 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.77□□□□□ -1.17
ABCA3Q99758 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
ABCA3Q99758 RPL37P18-201ENST00000411602 243 ntBASIC7.77□□□□□ -1.17
ABCA3Q99758 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.77□□□□□ -1.17
ABCA3Q99758 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.77□□□□□ -1.17
ABCA3Q99758 VN1R54P-201ENST00000435210 1049 ntBASIC7.77□□□□□ -1.17
ABCA3Q99758 EIF4EBP2P1-201ENST00000450009 343 ntBASIC7.77□□□□□ -1.17
ABCA3Q99758 AP000547.1-201ENST00000454360 617 ntBASIC7.77□□□□□ -1.17
ABCA3Q99758 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ABCA3Q99758 SCARNA6.1-201ENST00000516989 238 ntBASIC7.77□□□□□ -1.17
ABCA3Q99758 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.77□□□□□ -1.17
ABCA3Q99758 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.77□□□□□ -1.17
ABCA3Q99758 AC024255.1-201ENST00000614376 102 ntBASIC7.77□□□□□ -1.17
ABCA3Q99758 AC091953.3-201ENST00000623220 236 ntBASIC7.77□□□□□ -1.17
ABCA3Q99758 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.77□□□□□ -1.17
ABCA3Q99758 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ABCA3Q99758 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
ABCA3Q99758 AP002364.1-201ENST00000623330 3386 ntBASIC7.77□□□□□ -1.17
ABCA3Q99758 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
ABCA3Q99758 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.77□□□□□ -1.17
ABCA3Q99758 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ABCA3Q99758 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
ABCA3Q99758 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
ABCA3Q99758 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ABCA3Q99758 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ABCA3Q99758 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ABCA3Q99758 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
ABCA3Q99758 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.76□□□□□ -1.17
ABCA3Q99758 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ABCA3Q99758 RPS26P13-201ENST00000419030 330 ntBASIC7.76□□□□□ -1.17
ABCA3Q99758 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.76□□□□□ -1.17
ABCA3Q99758 OR6D1P-201ENST00000436165 939 ntBASIC7.76□□□□□ -1.17
ABCA3Q99758 AC092106.1-201ENST00000444291 373 ntBASIC7.76□□□□□ -1.17
ABCA3Q99758 EIF1P7-201ENST00000487533 337 ntBASIC7.76□□□□□ -1.17
ABCA3Q99758 AC022832.1-201ENST00000530718 645 ntBASIC7.76□□□□□ -1.17
ABCA3Q99758 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ABCA3Q99758 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.76□□□□□ -1.17
ABCA3Q99758 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.76□□□□□ -1.17
ABCA3Q99758 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.76□□□□□ -1.17
ABCA3Q99758 ELOCP28-201ENST00000590044 317 ntBASIC7.76□□□□□ -1.17
ABCA3Q99758 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.76□□□□□ -1.17
ABCA3Q99758 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ABCA3Q99758 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.76□□□□□ -1.17
ABCA3Q99758 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ABCA3Q99758 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.76□□□□□ -1.17
ABCA3Q99758 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ABCA3Q99758 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms