Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC135983.3-201ENST00000528049 1226 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AL391001.1-201ENST00000602747 715 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 OR7M1P-201ENST00000608946 533 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AL352984.2-201ENST00000611153 546 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 GAPDHP41-201ENST00000613707 975 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AC004836.1-201ENST00000623032 634 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AC021766.1-201ENST00000624404 741 ntBASIC7.15□□□□□ -1.26
CDK5RAP3Q96JB5 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.15□□□□□ -1.27
CDK5RAP3Q96JB5 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
CDK5RAP3Q96JB5 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDK5RAP3Q96JB5 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDK5RAP3Q96JB5 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.15□□□□□ -1.27
CDK5RAP3Q96JB5 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.15□□□□□ -1.27
CDK5RAP3Q96JB5 AP000866.6-201ENST00000638898 3579 ntBASIC7.15□□□□□ -1.27
CDK5RAP3Q96JB5 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.15□□□□□ -1.27
CDK5RAP3Q96JB5 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC7.15□□□□□ -1.27
CDK5RAP3Q96JB5 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDK5RAP3Q96JB5 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
CDK5RAP3Q96JB5 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CDK5RAP3Q96JB5 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AL591135.1-201ENST00000401578 5914 ntBASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 MTND2P9-201ENST00000422293 931 ntBASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AC234771.2-201ENST00000445718 597 ntBASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 COX4I1P2-201ENST00000447446 547 ntBASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 FTH1P8-201ENST00000498161 514 ntBASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AC008628.1-201ENST00000508663 265 ntBASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 OR4R2P-201ENST00000530815 597 ntBASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 OR4A42P-201ENST00000531397 938 ntBASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AL121579.2-201ENST00000555466 590 ntBASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 LINC00557-201ENST00000563184 1279 ntBASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 MIR744-201ENST00000578242 98 ntBASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 MIR5010-201ENST00000582846 120 ntBASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AP001885.1-201ENST00000621658 558 ntBASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP3Q96JB5 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 BIN2P1-201ENST00000504996 1530 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 RN7SKP184-201ENST00000362348 333 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 YWHAZP4-201ENST00000392459 708 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AC003045.1-201ENST00000398779 713 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AL358178.1-201ENST00000407698 397 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 EEF1B2P8-201ENST00000414101 671 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AL512504.1-201ENST00000415494 778 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 AC007568.1-201ENST00000422912 471 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 EMC3-AS1-205ENST00000438698 534 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 GTF2IP14-201ENST00000441415 586 ntBASIC7.13□□□□□ -1.27
CDK5RAP3Q96JB5 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms