Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC007603.3-201ENST00000636915 979 ntBASIC6.19□□□□□ -1.42
VMP1Q96GC9 AC217777.1-201ENST00000570034 1471 ntBASIC6.19□□□□□ -1.42
VMP1Q96GC9 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
VMP1Q96GC9 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
VMP1Q96GC9 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.19□□□□□ -1.42
VMP1Q96GC9 PSMC1P6-201ENST00000477233 1319 ntBASIC6.19□□□□□ -1.42
VMP1Q96GC9 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VMP1Q96GC9 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.19□□□□□ -1.42
VMP1Q96GC9 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
VMP1Q96GC9 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
VMP1Q96GC9 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VMP1Q96GC9 AC011369.2-201ENST00000624423 1567 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VMP1Q96GC9 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VMP1Q96GC9 SMG1P5-202ENST00000529428 4219 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 SMG1P2-201ENST00000566127 4221 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 FAM32BP-201ENST00000344033 333 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VMP1Q96GC9 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 SNORD8-201ENST00000363915 110 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 RANP6-201ENST00000413691 644 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
VMP1Q96GC9 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 GAPDHP37-201ENST00000442317 968 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 GAPDHP33-201ENST00000443168 1013 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 KF459542.1-201ENST00000450908 553 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VMP1Q96GC9 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 AP003115.1-201ENST00000569849 463 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 MIR212-201ENST00000586026 110 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
VMP1Q96GC9 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VMP1Q96GC9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VMP1Q96GC9 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VMP1Q96GC9 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.18□□□□□ -1.42
VMP1Q96GC9 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.18□□□□□ -1.42
VMP1Q96GC9 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VMP1Q96GC9 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 MRRFP1-201ENST00000435941 1675 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VMP1Q96GC9 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VMP1Q96GC9 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VMP1Q96GC9 PPIAP24-201ENST00000328558 471 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VMP1Q96GC9 RN7SKP237-201ENST00000364663 301 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 AC092106.2-201ENST00000436597 487 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 BX679664.2-201ENST00000439282 283 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 RPL12P49-201ENST00000441100 121 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 AC009963.4-201ENST00000448535 339 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 AC004890.1-201ENST00000461005 181 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VMP1Q96GC9 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 AC084033.1-201ENST00000550830 633 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 MIR3157-201ENST00000578688 85 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 AC245052.7-201ENST00000601161 359 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 AL049840.5-201ENST00000602827 552 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 AL122125.1-201ENST00000616999 600 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 AC048341.3-201ENST00000619323 491 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 AL354718.1-201ENST00000619764 589 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 AC006840.1-201ENST00000623069 542 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 AL162377.2-201ENST00000624532 337 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms