Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC7.61□□□□□ -1.19
DEPDC4Q8N2C3 AP003471.1-202ENST00000319051 1988 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AL354854.1-201ENST00000455940 1363 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC018992.1-201ENST00000523778 2149 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC135731.2-201ENST00000603029 2098 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 RNU6-181P-201ENST00000363225 107 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AL590002.1-201ENST00000406554 418 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 RN7SKP232-201ENST00000410170 290 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AL450992.3-201ENST00000413192 568 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 RMDN2-AS1-201ENST00000414365 859 ntTSL 4 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC114814.2-201ENST00000419195 485 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC233728.2-201ENST00000425348 757 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 RPL36P2-201ENST00000426026 315 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 KDM4A-AS1-203ENST00000434346 833 ntTSL 5 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AL450263.2-201ENST00000439400 589 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC027124.1-201ENST00000440852 466 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC244505.5-201ENST00000443639 207 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 LINC00894-207ENST00000452864 750 ntTSL 5 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 RPL12P8-201ENST00000482081 580 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 RN7SL659P-201ENST00000483093 299 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 RN7SL630P-201ENST00000483714 297 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC107956.2-201ENST00000496042 454 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC108078.3-201ENST00000502633 489 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 OR5H5P-201ENST00000503164 928 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC011352.3-201ENST00000505162 593 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC112203.1-201ENST00000506315 1020 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC046134.1-201ENST00000514454 666 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 RPL3P13-201ENST00000550415 216 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 COX5AP2-201ENST00000554418 394 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC013452.1-201ENST00000560630 598 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC087639.1-201ENST00000560974 920 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 TP53TG3HP-201ENST00000563487 346 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 HLA-P-207ENST00000568192 747 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 RPL17-212ENST00000581373 584 ntTSL 2 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 MIR3187-201ENST00000583431 70 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AL596327.1-201ENST00000603629 213 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC107214.2-201ENST00000608204 634 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC124864.2-201ENST00000624736 186 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AP005264.7-201ENST00000625003 745 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC026108.1-201ENST00000635444 547 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AF131215.2-201ENST00000531549 1710 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AL139805.2-201ENST00000455305 2433 ntBASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 DET1-202ENST00000444300 2154 ntTSL 5 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC7.6□□□□□ -1.19
DEPDC4Q8N2C3 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 SLC16A1P1-201ENST00000486743 1510 ntBASIC7.59□□□□□ -1.19
DEPDC4Q8N2C3 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms