Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 LDHAP1-201ENST00000509421 992 ntBASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 RN7SKP70-201ENST00000516655 271 ntBASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 TOMM20P1-201ENST00000534518 427 ntBASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 CYCSP38-201ENST00000559840 322 ntBASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 AC008507.3-201ENST00000585753 472 ntBASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 AL645933.2-201ENST00000606743 1207 ntBASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 AL137246.1-201ENST00000607072 977 ntBASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
C9orf40Q8IXQ3 AC018765.1-201ENST00000623357 3446 ntBASIC5.65□□□□□ -1.51
C9orf40Q8IXQ3 NR1H5P-201ENST00000452683 1377 ntBASIC5.65□□□□□ -1.51
C9orf40Q8IXQ3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
C9orf40Q8IXQ3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
C9orf40Q8IXQ3 AC078880.4-201ENST00000617627 1749 ntBASIC5.65□□□□□ -1.51
C9orf40Q8IXQ3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.65□□□□□ -1.51
C9orf40Q8IXQ3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
C9orf40Q8IXQ3 AC009831.5-201ENST00000624000 3189 ntBASIC5.65□□□□□ -1.51
C9orf40Q8IXQ3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.65□□□□□ -1.51
C9orf40Q8IXQ3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
C9orf40Q8IXQ3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 RNU105B-201ENST00000364478 208 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 RNA5SP433-201ENST00000364491 114 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 SNORA70H-201ENST00000383910 135 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 SNORA70J-201ENST00000384182 135 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 MIR621-201ENST00000384919 96 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC245096.1-201ENST00000413104 546 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 RPS17P17-201ENST00000419392 409 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC110602.1-201ENST00000437414 318 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 PPIAP27-201ENST00000453800 265 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC098847.1-201ENST00000473094 348 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 RN7SKP238-201ENST00000516483 249 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC105036.1-201ENST00000566222 271 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC027334.1-201ENST00000603257 310 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC009237.12-201ENST00000604755 742 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AL137246.2-201ENST00000613439 662 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC025262.3-201ENST00000623666 360 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 CAP1P2-201ENST00000417455 1409 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC034229.2-201ENST00000566945 2508 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 LYARP1-201ENST00000436977 1501 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 PSG10P-201ENST00000501199 1500 ntBASIC5.64□□□□□ -1.51
C9orf40Q8IXQ3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 LCN1P2-201ENST00000372030 223 ntBASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 RN7SKP240-201ENST00000410583 375 ntBASIC5.63□□□□□ -1.51
C9orf40Q8IXQ3 HMGA1P8-201ENST00000414130 321 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms