Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZNF549Q6P9A3 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AL359091.1-201ENST00000449048 1734 ntBASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 MIR551B-201ENST00000384984 96 ntBASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AC245884.2-201ENST00000426257 404 ntBASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AC007386.1-201ENST00000455212 582 ntBASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 RPS7P10-201ENST00000464254 603 ntBASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AP000926.3-201ENST00000497201 299 ntBASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AC008555.7-201ENST00000605008 583 ntBASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 NF1P10-201ENST00000613227 742 ntBASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AC015819.1-201ENST00000613588 663 ntBASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AC007603.3-201ENST00000636915 979 ntBASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AC138627.1-204ENST00000641894 765 ntBASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 AC011416.1-201ENST00000514947 1732 ntBASIC6.11□□□□□ -1.43
ZNF549Q6P9A3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 RNU6-167P-201ENST00000384292 106 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 RNA5SP198-201ENST00000410376 127 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 CASKP1-201ENST00000412870 582 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 AC016027.5-201ENST00000427227 210 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 RPS18P1-201ENST00000447840 458 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 MTND3P4-201ENST00000453537 303 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 RPL7L1P3-201ENST00000455249 689 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 AC004890.1-201ENST00000461005 181 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 RPL5P16-201ENST00000471467 790 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 AL355032.1-201ENST00000472981 438 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 H3F3AP5-201ENST00000475267 429 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 AC095052.1-201ENST00000509955 863 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 GUSBP9-201ENST00000510138 584 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 AC023389.2-201ENST00000580031 955 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 GLYATL1P2-202ENST00000588046 902 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 NDUFB9P1-201ENST00000604683 510 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 AL139041.1-201ENST00000605480 610 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 AC073389.3-201ENST00000609434 935 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 HPVC1-201ENST00000629899 1198 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 AC091948.2-201ENST00000636510 279 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 IMMTP1-201ENST00000435590 2219 ntBASIC6.1□□□□□ -1.43
ZNF549Q6P9A3 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 328.3 ms