Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC9□□□□□ -0.97
VARS2Q5ST30 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
VARS2Q5ST30 AMPD3-208ENST00000528723 2753 ntTSL 2 BASIC9□□□□□ -0.97
VARS2Q5ST30 MAPK10-255ENST00000641020 2412 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VARS2Q5ST30 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
VARS2Q5ST30 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC9□□□□□ -0.97
VARS2Q5ST30 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 TUBA1A-202ENST00000301071 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 CACNA1D-202ENST00000350061 7636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 SH2D4B-202ENST00000339284 3983 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 AC114786.2-201ENST00000510090 1426 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 GTF2IP7-201ENST00000434037 2399 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 MAPK10-240ENST00000639175 2596 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 CREM-204ENST00000345491 2220 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 ATF3-204ENST00000366983 858 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 MIR654-201ENST00000385199 81 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 AL049697.2-201ENST00000403708 294 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 HMGN1P34-201ENST00000413023 290 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 AL031733.1-201ENST00000422817 455 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 Z97634.1-203ENST00000435229 471 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 IFNA20P-201ENST00000436840 528 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 SETP5-201ENST00000437270 562 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 AC079448.1-201ENST00000449377 373 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 RNU7-152P-201ENST00000458982 64 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 RN7SL757P-201ENST00000466709 301 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 RPL22-207ENST00000484532 449 ntTSL 2 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 ACTG1P13-201ENST00000486987 1043 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 COPS8P3-201ENST00000526024 482 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 AC087276.1-201ENST00000529659 480 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 AC044913.1-201ENST00000557200 430 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 MIR3689C-201ENST00000581239 72 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 BOLA2P1-201ENST00000584794 232 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 AC091903.1-201ENST00000624322 454 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 AC073488.5-201ENST00000631993 754 ntBASIC8.99□□□□□ -0.97
VARS2Q5ST30 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 LRRC4C-203ENST00000528697 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 PABPC4L-201ENST00000421491 4944 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 ADAMTS9-AS1-206ENST00000493124 1511 ntTSL 5 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC8.99□□□□□ -0.97
VARS2Q5ST30 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VARS2Q5ST30 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 ZNF726-206ENST00000594466 2473 ntTSL 5 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC074281.1-201ENST00000436419 2081 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 MFAP5-203ENST00000433590 2308 ntTSL 2 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC023818.2-201ENST00000623817 2304 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 CLUHP3-206ENST00000562354 4117 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 NRK-204ENST00000540278 1687 ntTSL 2 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 TPH2-201ENST00000333850 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 RUBCNL-202ENST00000378784 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 MKNK1-AS1-201ENST00000602433 2445 ntTSL 2 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 PIWIL3-205ENST00000616349 3111 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
VARS2Q5ST30 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VARS2Q5ST30 RNU6-1322P-201ENST00000364309 107 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 RNU6-359P-201ENST00000365466 108 ntBASIC8.98□□□□□ -0.97
VARS2Q5ST30 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms