Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 SETP3-201ENST00000581726 813 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC8.37□□□□□ -1.07
PTCH1Q13635 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC8.37□□□□□ -1.07
PTCH1Q13635 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PTCH1Q13635 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PTCH1Q13635 AP001541.1-201ENST00000623322 1904 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.37□□□□□ -1.07
PTCH1Q13635 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PTCH1Q13635 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
PTCH1Q13635 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTCH1Q13635 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PTCH1Q13635 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.37□□□□□ -1.07
PTCH1Q13635 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PTCH1Q13635 PABPC1P6-201ENST00000445594 1829 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PTCH1Q13635 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PTCH1Q13635 AL731556.1-201ENST00000394628 3711 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.37□□□□□ -1.07
PTCH1Q13635 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
PTCH1Q13635 AL133270.1-201ENST00000402635 279 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC8.37□□□□□ -1.07
PTCH1Q13635 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC8.37□□□□□ -1.07
PTCH1Q13635 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC8.37□□□□□ -1.07
PTCH1Q13635 AL359091.1-201ENST00000449048 1734 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 AC022215.1-201ENST00000481770 362 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 RPS3AP15-201ENST00000483874 781 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 OR7E157P-201ENST00000494376 911 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 AC008629.2-201ENST00000503783 483 ntBASIC8.37□□□□□ -1.07
PTCH1Q13635 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.37□□□□□ -1.07
PTCH1Q13635 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
PTCH1Q13635 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC8.37□□□□□ -1.07
PTCH1Q13635 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTCH1Q13635 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC8.36□□□□□ -1.07
PTCH1Q13635 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
PTCH1Q13635 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PTCH1Q13635 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTCH1Q13635 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
PTCH1Q13635 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
PTCH1Q13635 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.36□□□□□ -1.07
PTCH1Q13635 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTCH1Q13635 OR10R3P-201ENST00000361688 942 ntBASIC8.36□□□□□ -1.07
PTCH1Q13635 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTCH1Q13635 AL022331.1-201ENST00000429025 477 ntBASIC8.36□□□□□ -1.07
PTCH1Q13635 FMO7P-201ENST00000436045 768 ntBASIC8.36□□□□□ -1.07
PTCH1Q13635 ELOCP3-201ENST00000439303 348 ntBASIC8.36□□□□□ -1.07
PTCH1Q13635 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.36□□□□□ -1.07
PTCH1Q13635 LRRC37A14P-201ENST00000452297 462 ntBASIC8.36□□□□□ -1.07
PTCH1Q13635 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.36□□□□□ -1.07
PTCH1Q13635 BX510359.5-201ENST00000515651 304 ntBASIC8.36□□□□□ -1.07
PTCH1Q13635 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC8.36□□□□□ -1.07
PTCH1Q13635 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC8.36□□□□□ -1.07
PTCH1Q13635 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC8.36□□□□□ -1.07
PTCH1Q13635 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTCH1Q13635 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC8.36□□□□□ -1.07
PTCH1Q13635 AC007204.2-201ENST00000615022 616 ntBASIC8.36□□□□□ -1.07
PTCH1Q13635 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.36□□□□□ -1.07
PTCH1Q13635 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.36□□□□□ -1.07
PTCH1Q13635 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
PTCH1Q13635 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.35□□□□□ -1.07
PTCH1Q13635 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
PTCH1Q13635 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTCH1Q13635 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTCH1Q13635 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PTCH1Q13635 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
PTCH1Q13635 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
PTCH1Q13635 RNA5SP211-201ENST00000365516 117 ntBASIC8.35□□□□□ -1.07
PTCH1Q13635 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.35□□□□□ -1.07
PTCH1Q13635 CYCSP51-201ENST00000443545 318 ntBASIC8.35□□□□□ -1.07
PTCH1Q13635 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC8.35□□□□□ -1.07
PTCH1Q13635 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PTCH1Q13635 RN7SL184P-201ENST00000488308 297 ntBASIC8.35□□□□□ -1.07
PTCH1Q13635 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC8.35□□□□□ -1.07
PTCH1Q13635 AC096754.1-201ENST00000508904 818 ntBASIC8.35□□□□□ -1.07
PTCH1Q13635 RNU6-615P-201ENST00000516065 106 ntBASIC8.35□□□□□ -1.07
PTCH1Q13635 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.35□□□□□ -1.07
PTCH1Q13635 IGBP1P1-201ENST00000554337 1009 ntBASIC8.35□□□□□ -1.07
PTCH1Q13635 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PTCH1Q13635 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.35□□□□□ -1.07
PTCH1Q13635 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PTCH1Q13635 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.35□□□□□ -1.07
PTCH1Q13635 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PTCH1Q13635 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTCH1Q13635 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTCH1Q13635 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTCH1Q13635 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTCH1Q13635 AC089998.1-201ENST00000548575 3141 ntBASIC8.34□□□□□ -1.07
PTCH1Q13635 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTCH1Q13635 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.34□□□□□ -1.07
PTCH1Q13635 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
PTCH1Q13635 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC8.34□□□□□ -1.07
PTCH1Q13635 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC8.34□□□□□ -1.07
PTCH1Q13635 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC8.34□□□□□ -1.07
PTCH1Q13635 SNRPEP6-201ENST00000407465 277 ntBASIC8.34□□□□□ -1.07
PTCH1Q13635 SSR1P1-201ENST00000407630 814 ntBASIC8.34□□□□□ -1.07
PTCH1Q13635 MRPL53P1-201ENST00000414323 319 ntBASIC8.34□□□□□ -1.07
PTCH1Q13635 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.34□□□□□ -1.07
PTCH1Q13635 CFL1P1-202ENST00000432948 411 ntBASIC8.34□□□□□ -1.07
PTCH1Q13635 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.34□□□□□ -1.07
PTCH1Q13635 AL157777.1-201ENST00000468100 304 ntBASIC8.34□□□□□ -1.07
PTCH1Q13635 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms