Protein–RNA interactions for Protein: Q00610

CLTC, Clathrin heavy chain 1, humanhuman

Known RBP Predictions only

Length 1,675 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCQ00610 MIR223-201ENST00000385204 110 ntBASIC8.6□□□□□ -1.03
CLTCQ00610 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.6□□□□□ -1.03
CLTCQ00610 AC147055.3-201ENST00000510547 851 ntBASIC8.6□□□□□ -1.03
CLTCQ00610 AP000676.2-201ENST00000529711 301 ntBASIC8.6□□□□□ -1.03
CLTCQ00610 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC8.6□□□□□ -1.03
CLTCQ00610 AC145423.1-201ENST00000605712 336 ntBASIC8.6□□□□□ -1.03
CLTCQ00610 AL139099.4-201ENST00000614802 114 ntBASIC8.6□□□□□ -1.03
CLTCQ00610 AC022726.2-201ENST00000634673 547 ntBASIC8.6□□□□□ -1.03
CLTCQ00610 AFP-201ENST00000226359 1914 ntTSL 5 BASIC8.6□□□□□ -1.03
CLTCQ00610 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CLTCQ00610 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 AC087516.1-201ENST00000561236 2428 ntBASIC8.6□□□□□ -1.03
CLTCQ00610 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CLTCQ00610 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CLTCQ00610 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
CLTCQ00610 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.59□□□□□ -1.03
CLTCQ00610 RPL37P18-201ENST00000411602 243 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 OR52B5P-201ENST00000435337 951 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 PSMD10P3-201ENST00000437000 448 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC8.59□□□□□ -1.03
CLTCQ00610 AC004453.1-201ENST00000487895 408 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 RPEP1-201ENST00000504507 658 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 AC024451.1-201ENST00000508013 779 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.59□□□□□ -1.03
CLTCQ00610 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.59□□□□□ -1.03
CLTCQ00610 OR52B5P-202ENST00000641118 1110 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.59□□□□□ -1.03
CLTCQ00610 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CLTCQ00610 AC092692.1-201ENST00000623625 2595 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CLTCQ00610 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.59□□□□□ -1.03
CLTCQ00610 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CLTCQ00610 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
CLTCQ00610 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CLTCQ00610 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CLTCQ00610 AC011369.2-201ENST00000624423 1567 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CLTCQ00610 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CLTCQ00610 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC8.59□□□□□ -1.03
CLTCQ00610 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
CLTCQ00610 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
CLTCQ00610 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CLTCQ00610 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.59□□□□□ -1.03
CLTCQ00610 AL590004.4-201ENST00000566733 7060 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.59□□□□□ -1.03
CLTCQ00610 AC019185.1-201ENST00000442718 389 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC8.59□□□□□ -1.03
CLTCQ00610 RPL7P61-201ENST00000451721 751 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC8.59□□□□□ -1.03
CLTCQ00610 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
CLTCQ00610 MIR6837-201ENST00000620884 64 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 AP002505.2-201ENST00000623585 696 ntBASIC8.59□□□□□ -1.03
CLTCQ00610 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
CLTCQ00610 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CLTCQ00610 AC016583.1-201ENST00000624221 2431 ntBASIC8.58□□□□□ -1.04
CLTCQ00610 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
CLTCQ00610 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CLTCQ00610 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
CLTCQ00610 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
CLTCQ00610 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CLTCQ00610 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC8.58□□□□□ -1.04
CLTCQ00610 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CLTCQ00610 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
CLTCQ00610 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC8.58□□□□□ -1.04
CLTCQ00610 AL450023.1-201ENST00000450868 751 ntBASIC8.58□□□□□ -1.04
CLTCQ00610 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CLTCQ00610 RPL15P21-201ENST00000495592 567 ntBASIC8.58□□□□□ -1.04
CLTCQ00610 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC8.58□□□□□ -1.04
CLTCQ00610 GARSP1-201ENST00000570895 719 ntBASIC8.58□□□□□ -1.04
CLTCQ00610 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
CLTCQ00610 AP002370.1-201ENST00000528055 1602 ntBASIC8.58□□□□□ -1.04
CLTCQ00610 AC096921.2-201ENST00000561507 1916 ntBASIC8.58□□□□□ -1.04
CLTCQ00610 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.58□□□□□ -1.04
CLTCQ00610 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CLTCQ00610 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
CLTCQ00610 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CLTCQ00610 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CLTCQ00610 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
CLTCQ00610 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CLTCQ00610 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CLTCQ00610 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
CLTCQ00610 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
CLTCQ00610 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.57□□□□□ -1.04
CLTCQ00610 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC8.57□□□□□ -1.04
CLTCQ00610 RN7SKP103-201ENST00000363848 320 ntBASIC8.57□□□□□ -1.04
CLTCQ00610 AL357752.1-201ENST00000412817 349 ntBASIC8.57□□□□□ -1.04
CLTCQ00610 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC8.57□□□□□ -1.04
CLTCQ00610 AC005297.1-201ENST00000444765 862 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms