Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
RIPK4P57078 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
RIPK4P57078 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
RIPK4P57078 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.95□□□□□ -1.14
RIPK4P57078 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
RIPK4P57078 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RIPK4P57078 AL121768.1-201ENST00000613917 2544 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RIPK4P57078 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RIPK4P57078 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
RIPK4P57078 QRSL1P1-201ENST00000400977 1540 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
RIPK4P57078 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.95□□□□□ -1.14
RIPK4P57078 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.95□□□□□ -1.14
RIPK4P57078 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.95□□□□□ -1.14
RIPK4P57078 RN7SKP151-201ENST00000410230 316 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 RPL35AP3-201ENST00000414680 288 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 RPS17P17-201ENST00000419392 409 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RIPK4P57078 AC066692.1-201ENST00000421721 457 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 AC002069.1-201ENST00000429649 1159 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.95□□□□□ -1.14
RIPK4P57078 GAPDHP34-201ENST00000432112 823 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.95□□□□□ -1.14
RIPK4P57078 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RIPK4P57078 AC079922.1-201ENST00000443291 359 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 AC005077.1-201ENST00000449226 375 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RIPK4P57078 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
RIPK4P57078 TPM3P3-201ENST00000521343 354 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 TRIM77BP-201ENST00000524985 1119 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 AC007956.1-201ENST00000555623 542 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.95□□□□□ -1.14
RIPK4P57078 AC005726.4-201ENST00000582858 458 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 AL138895.2-201ENST00000603019 178 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.95□□□□□ -1.14
RIPK4P57078 AL136097.3-201ENST00000611097 505 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
RIPK4P57078 MIR6778-201ENST00000617912 73 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
RIPK4P57078 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
RIPK4P57078 CASC19-238ENST00000641523 1558 ntBASIC7.95□□□□□ -1.14
RIPK4P57078 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
RIPK4P57078 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RIPK4P57078 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.94□□□□□ -1.14
RIPK4P57078 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RIPK4P57078 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
RIPK4P57078 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RIPK4P57078 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RIPK4P57078 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RIPK4P57078 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RIPK4P57078 RNA5SP273-201ENST00000362484 113 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.94□□□□□ -1.14
RIPK4P57078 OR2W4P-201ENST00000406496 926 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 AL354890.1-201ENST00000413730 346 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.94□□□□□ -1.14
RIPK4P57078 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RIPK4P57078 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
RIPK4P57078 GAPDHP75-201ENST00000433910 943 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 AL445466.1-201ENST00000448432 357 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 RN7SL269P-201ENST00000467795 305 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 AC114728.1-201ENST00000488289 483 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 RPL17P2-201ENST00000491913 451 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 OR5H7P-201ENST00000514084 930 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.94□□□□□ -1.14
RIPK4P57078 OR56A7P-201ENST00000524865 941 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.94□□□□□ -1.14
RIPK4P57078 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.94□□□□□ -1.14
RIPK4P57078 AC119403.2-201ENST00000590960 598 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 AC108865.2-201ENST00000606881 432 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 AC245014.3-201ENST00000618589 347 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.94□□□□□ -1.14
RIPK4P57078 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.94□□□□□ -1.14
RIPK4P57078 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RIPK4P57078 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.94□□□□□ -1.14
RIPK4P57078 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RIPK4P57078 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.94□□□□□ -1.14
RIPK4P57078 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.94□□□□□ -1.14
RIPK4P57078 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.94□□□□□ -1.14
RIPK4P57078 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
RIPK4P57078 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.93□□□□□ -1.14
RIPK4P57078 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RIPK4P57078 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RIPK4P57078 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RIPK4P57078 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
RIPK4P57078 RNA5SP477-201ENST00000362639 119 ntBASIC7.93□□□□□ -1.14
RIPK4P57078 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
RIPK4P57078 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.93□□□□□ -1.14
RIPK4P57078 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.93□□□□□ -1.14
RIPK4P57078 AL451063.1-201ENST00000450164 1133 ntBASIC7.93□□□□□ -1.14
RIPK4P57078 CFL1P4-201ENST00000451536 498 ntBASIC7.93□□□□□ -1.14
RIPK4P57078 RAB28P2-201ENST00000454299 641 ntBASIC7.93□□□□□ -1.14
RIPK4P57078 RN7SL352P-201ENST00000466002 277 ntBASIC7.93□□□□□ -1.14
RIPK4P57078 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.93□□□□□ -1.14
RIPK4P57078 AC008945.1-201ENST00000505144 499 ntBASIC7.93□□□□□ -1.14
RIPK4P57078 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RIPK4P57078 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.93□□□□□ -1.14
RIPK4P57078 AC005244.1-201ENST00000582566 339 ntBASIC7.93□□□□□ -1.14
RIPK4P57078 AC090236.2-201ENST00000587933 1101 ntBASIC7.93□□□□□ -1.14
RIPK4P57078 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms