Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN20P56880 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN20P56880 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN20P56880 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN20P56880 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CLDN20P56880 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CLDN20P56880 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN20P56880 Y_RNA.62-201ENST00000362840 99 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN20P56880 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN20P56880 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN20P56880 AL050305.1-201ENST00000399993 1230 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.78□□□□□ -1.48
CLDN20P56880 RPL21P50-201ENST00000417698 477 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 AL139158.1-201ENST00000424719 340 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 Z85994.2-201ENST00000434327 452 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 OR2L9P-201ENST00000444456 913 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 AL356390.1-201ENST00000455684 397 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 snoU13.29-201ENST00000459370 104 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 RNU7-157P-201ENST00000459600 66 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN20P56880 H3F3AP5-201ENST00000475267 429 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN20P56880 AC091965.3-201ENST00000506236 208 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.78□□□□□ -1.48
CLDN20P56880 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN20P56880 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN20P56880 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN20P56880 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN20P56880 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN20P56880 AC008055.1-201ENST00000547032 609 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.78□□□□□ -1.48
CLDN20P56880 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN20P56880 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN20P56880 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN20P56880 AC009779.8-202ENST00000607990 932 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN20P56880 AP005131.7-201ENST00000610087 611 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.78□□□□□ -1.48
CLDN20P56880 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN20P56880 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN20P56880 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN20P56880 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN20P56880 AC010325.3-201ENST00000641084 394 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLDN20P56880 AC011455.2-201ENST00000599320 3336 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN20P56880 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN20P56880 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN20P56880 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN20P56880 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN20P56880 AL359976.1-201ENST00000418655 3528 ntBASIC5.78□□□□□ -1.48
CLDN20P56880 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN20P56880 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN20P56880 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CLDN20P56880 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
CLDN20P56880 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.48
CLDN20P56880 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN20P56880 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CLDN20P56880 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.77□□□□□ -1.49
CLDN20P56880 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 AL355834.1-201ENST00000556602 3965 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN20P56880 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CLDN20P56880 USP9YP19-201ENST00000412165 485 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.77□□□□□ -1.49
CLDN20P56880 HMGA1P8-201ENST00000414130 321 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 DHFRP2-201ENST00000414224 547 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 AL359885.1-201ENST00000415786 903 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN20P56880 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN20P56880 OSTCP4-201ENST00000424397 449 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 AL157884.1-201ENST00000424561 454 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 VN1R20P-201ENST00000425215 966 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.77□□□□□ -1.49
CLDN20P56880 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.77□□□□□ -1.49
CLDN20P56880 MGAT2P1-201ENST00000449718 797 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN20P56880 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.77□□□□□ -1.49
CLDN20P56880 AL049829.1-201ENST00000465411 156 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.77□□□□□ -1.49
CLDN20P56880 AC025181.1-201ENST00000477507 416 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 AC093827.1-201ENST00000480094 861 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 AC005017.1-201ENST00000482002 490 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 RPS27P20-201ENST00000492051 246 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 OR2A3P-201ENST00000493774 953 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.77□□□□□ -1.49
CLDN20P56880 SNORA74.1-201ENST00000516320 180 ntBASIC5.77□□□□□ -1.49
CLDN20P56880 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN20P56880 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.77□□□□□ -1.49
CLDN20P56880 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.77□□□□□ -1.49
CLDN20P56880 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN20P56880 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN20P56880 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms