Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CDH4P55283 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH4P55283 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.28□□□□□ -1.4
CDH4P55283 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CDH4P55283 MIR130B-202ENST00000385018 82 ntBASIC6.28□□□□□ -1.4
CDH4P55283 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH4P55283 AC245096.1-201ENST00000413104 546 ntBASIC6.28□□□□□ -1.4
CDH4P55283 AL096829.1-201ENST00000413677 457 ntBASIC6.28□□□□□ -1.4
CDH4P55283 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH4P55283 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDH4P55283 AC007562.1-201ENST00000421819 517 ntBASIC6.28□□□□□ -1.4
CDH4P55283 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH4P55283 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.28□□□□□ -1.4
CDH4P55283 RPL12P12-201ENST00000424633 501 ntBASIC6.28□□□□□ -1.4
CDH4P55283 AC079922.1-201ENST00000443291 359 ntBASIC6.28□□□□□ -1.4
CDH4P55283 AC023274.2-201ENST00000445264 521 ntBASIC6.28□□□□□ -1.4
CDH4P55283 FTLP8-201ENST00000446770 267 ntBASIC6.28□□□□□ -1.4
CDH4P55283 RPL23AP60-201ENST00000450011 454 ntBASIC6.28□□□□□ -1.4
CDH4P55283 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.28□□□□□ -1.4
CDH4P55283 PPIAP27-201ENST00000453800 265 ntBASIC6.28□□□□□ -1.4
CDH4P55283 AC023194.2-201ENST00000465398 406 ntBASIC6.28□□□□□ -1.4
CDH4P55283 AC098847.1-201ENST00000473094 348 ntBASIC6.28□□□□□ -1.4
CDH4P55283 RPL17P2-201ENST00000491913 451 ntBASIC6.28□□□□□ -1.4
CDH4P55283 PFN1P8-201ENST00000497012 543 ntBASIC6.28□□□□□ -1.4
CDH4P55283 LSM3P4-201ENST00000502948 309 ntBASIC6.28□□□□□ -1.4
CDH4P55283 AL158068.1-201ENST00000506116 616 ntBASIC6.28□□□□□ -1.4
CDH4P55283 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.28□□□□□ -1.4
CDH4P55283 AC090115.2-201ENST00000548060 883 ntBASIC6.28□□□□□ -1.4
CDH4P55283 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.28□□□□□ -1.4
CDH4P55283 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.28□□□□□ -1.4
CDH4P55283 RNU4ATAC-201ENST00000580972 127 ntBASIC6.28□□□□□ -1.4
CDH4P55283 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.28□□□□□ -1.4
CDH4P55283 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.28□□□□□ -1.4
CDH4P55283 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH4P55283 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.28□□□□□ -1.4
CDH4P55283 AL645933.2-201ENST00000606743 1207 ntBASIC6.28□□□□□ -1.4
CDH4P55283 AL137246.2-201ENST00000613439 662 ntBASIC6.28□□□□□ -1.4
CDH4P55283 RN7SL261P-201ENST00000613441 282 ntBASIC6.28□□□□□ -1.4
CDH4P55283 MIR6071-201ENST00000616741 78 ntBASIC6.28□□□□□ -1.4
CDH4P55283 AC025262.3-201ENST00000623666 360 ntBASIC6.28□□□□□ -1.4
CDH4P55283 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CDH4P55283 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH4P55283 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH4P55283 MTCO1P28-201ENST00000574177 1528 ntBASIC6.28□□□□□ -1.4
CDH4P55283 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH4P55283 AC022034.1-201ENST00000512867 2156 ntBASIC6.28□□□□□ -1.4
CDH4P55283 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH4P55283 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CDH4P55283 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CDH4P55283 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CDH4P55283 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
CDH4P55283 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH4P55283 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH4P55283 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH4P55283 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CDH4P55283 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH4P55283 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH4P55283 USP9YP3-201ENST00000434481 1766 ntBASIC6.27□□□□□ -1.41
CDH4P55283 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH4P55283 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH4P55283 LYARP1-201ENST00000436977 1501 ntBASIC6.27□□□□□ -1.41
CDH4P55283 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH4P55283 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH4P55283 RNU105B-201ENST00000364478 208 ntBASIC6.27□□□□□ -1.41
CDH4P55283 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH4P55283 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH4P55283 SNORA11.5-201ENST00000408163 128 ntBASIC6.27□□□□□ -1.41
CDH4P55283 AC116036.1-201ENST00000412199 367 ntBASIC6.27□□□□□ -1.41
CDH4P55283 TMA16P2-201ENST00000413187 601 ntBASIC6.27□□□□□ -1.41
CDH4P55283 HMGA1P8-201ENST00000414130 321 ntBASIC6.27□□□□□ -1.41
CDH4P55283 RPS15AP30-201ENST00000420976 390 ntBASIC6.27□□□□□ -1.41
CDH4P55283 AKR1B10P1-201ENST00000425765 942 ntBASIC6.27□□□□□ -1.41
CDH4P55283 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH4P55283 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH4P55283 AL512593.1-201ENST00000444758 779 ntBASIC6.27□□□□□ -1.41
CDH4P55283 ZNF619P1-201ENST00000446539 752 ntBASIC6.27□□□□□ -1.41
CDH4P55283 RPL7L1P3-201ENST00000455249 689 ntBASIC6.27□□□□□ -1.41
CDH4P55283 AC112187.1-201ENST00000455837 479 ntBASIC6.27□□□□□ -1.41
CDH4P55283 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH4P55283 FTH1P8-201ENST00000498161 514 ntBASIC6.27□□□□□ -1.41
CDH4P55283 LDHAP1-201ENST00000509421 992 ntBASIC6.27□□□□□ -1.41
CDH4P55283 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH4P55283 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH4P55283 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH4P55283 OR4A40P-201ENST00000533878 948 ntBASIC6.27□□□□□ -1.41
CDH4P55283 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH4P55283 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.27□□□□□ -1.41
CDH4P55283 CYCSP38-201ENST00000559840 322 ntBASIC6.27□□□□□ -1.41
CDH4P55283 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH4P55283 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CDH4P55283 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH4P55283 AC096861.1-201ENST00000616652 240 ntBASIC6.27□□□□□ -1.41
CDH4P55283 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH4P55283 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH4P55283 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH4P55283 AL353763.1-201ENST00000624467 1628 ntBASIC6.27□□□□□ -1.41
CDH4P55283 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.27□□□□□ -1.41
CDH4P55283 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH4P55283 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CDH4P55283 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms