Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.36□□□□□ -1.23
NUP98P52948 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.36□□□□□ -1.23
NUP98P52948 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.36□□□□□ -1.23
NUP98P52948 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.36□□□□□ -1.23
NUP98P52948 RN7SL466P-201ENST00000497546 295 ntBASIC7.36□□□□□ -1.23
NUP98P52948 AC109481.1-201ENST00000509173 282 ntBASIC7.36□□□□□ -1.23
NUP98P52948 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.36□□□□□ -1.23
NUP98P52948 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.36□□□□□ -1.23
NUP98P52948 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.36□□□□□ -1.23
NUP98P52948 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
NUP98P52948 AL353763.1-201ENST00000624467 1628 ntBASIC7.36□□□□□ -1.23
NUP98P52948 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
NUP98P52948 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
NUP98P52948 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NUP98P52948 AC117409.1-201ENST00000470499 1310 ntBASIC7.36□□□□□ -1.23
NUP98P52948 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
NUP98P52948 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NUP98P52948 PABPC1P6-201ENST00000445594 1829 ntBASIC7.36□□□□□ -1.23
NUP98P52948 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
NUP98P52948 AC025470.1-201ENST00000510053 2032 ntBASIC7.36□□□□□ -1.23
NUP98P52948 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NUP98P52948 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.36□□□□□ -1.23
NUP98P52948 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.36□□□□□ -1.23
NUP98P52948 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.36□□□□□ -1.23
NUP98P52948 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NUP98P52948 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
NUP98P52948 RPL35AP24-201ENST00000413846 330 ntBASIC7.36□□□□□ -1.23
NUP98P52948 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NUP98P52948 CLUHP1-201ENST00000435012 1190 ntBASIC7.36□□□□□ -1.23
NUP98P52948 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.36□□□□□ -1.23
NUP98P52948 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.36□□□□□ -1.23
NUP98P52948 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.36□□□□□ -1.23
NUP98P52948 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.36□□□□□ -1.23
NUP98P52948 AC079922.1-201ENST00000443291 359 ntBASIC7.36□□□□□ -1.23
NUP98P52948 ACA64.4-201ENST00000459070 127 ntBASIC7.36□□□□□ -1.23
NUP98P52948 IGBP1P1-201ENST00000554337 1009 ntBASIC7.36□□□□□ -1.23
NUP98P52948 AC007494.1-201ENST00000562293 760 ntBASIC7.36□□□□□ -1.23
NUP98P52948 IMMP1LP3-201ENST00000604197 224 ntBASIC7.36□□□□□ -1.23
NUP98P52948 AC136428.4-201ENST00000634254 1155 ntBASIC7.36□□□□□ -1.23
NUP98P52948 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
NUP98P52948 YES1P1-201ENST00000418510 1628 ntBASIC7.36□□□□□ -1.23
NUP98P52948 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NUP98P52948 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.35□□□□□ -1.23
NUP98P52948 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUP98P52948 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUP98P52948 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUP98P52948 MRE11P1-201ENST00000464884 2127 ntBASIC7.35□□□□□ -1.23
NUP98P52948 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUP98P52948 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUP98P52948 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NUP98P52948 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUP98P52948 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.35□□□□□ -1.23
NUP98P52948 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUP98P52948 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUP98P52948 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
NUP98P52948 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUP98P52948 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.35□□□□□ -1.23
NUP98P52948 AC019205.1-201ENST00000421830 730 ntBASIC7.35□□□□□ -1.23
NUP98P52948 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.35□□□□□ -1.23
NUP98P52948 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.35□□□□□ -1.23
NUP98P52948 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.35□□□□□ -1.23
NUP98P52948 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.35□□□□□ -1.23
NUP98P52948 MRPS16P1-201ENST00000523462 412 ntBASIC7.35□□□□□ -1.23
NUP98P52948 AC096996.1-201ENST00000563813 325 ntBASIC7.35□□□□□ -1.23
NUP98P52948 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
NUP98P52948 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.35□□□□□ -1.23
NUP98P52948 FO393422.1-201ENST00000603908 708 ntBASIC7.35□□□□□ -1.23
NUP98P52948 AC091193.1-201ENST00000604640 448 ntBASIC7.35□□□□□ -1.23
NUP98P52948 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.35□□□□□ -1.23
NUP98P52948 AL691477.1-201ENST00000624398 162 ntBASIC7.35□□□□□ -1.23
NUP98P52948 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NUP98P52948 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUP98P52948 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NUP98P52948 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NUP98P52948 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUP98P52948 AC114786.1-201ENST00000512892 1415 ntBASIC7.34□□□□□ -1.23
NUP98P52948 AL121768.1-201ENST00000613917 2544 ntBASIC7.34□□□□□ -1.23
NUP98P52948 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.34□□□□□ -1.23
NUP98P52948 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
NUP98P52948 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NUP98P52948 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NUP98P52948 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUP98P52948 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NUP98P52948 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.34□□□□□ -1.23
NUP98P52948 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.34□□□□□ -1.23
NUP98P52948 RPS6P23-201ENST00000413224 722 ntBASIC7.34□□□□□ -1.23
NUP98P52948 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.34□□□□□ -1.23
NUP98P52948 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NUP98P52948 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.34□□□□□ -1.23
NUP98P52948 AC022215.1-201ENST00000481770 362 ntBASIC7.34□□□□□ -1.23
NUP98P52948 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC7.34□□□□□ -1.23
NUP98P52948 CYP4F27P-201ENST00000514557 494 ntBASIC7.34□□□□□ -1.23
NUP98P52948 RNA5SP34-201ENST00000516887 130 ntBASIC7.34□□□□□ -1.23
NUP98P52948 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.34□□□□□ -1.23
NUP98P52948 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NUP98P52948 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.34□□□□□ -1.23
NUP98P52948 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.34□□□□□ -1.23
NUP98P52948 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.34□□□□□ -1.23
NUP98P52948 AL139099.4-201ENST00000614802 114 ntBASIC7.34□□□□□ -1.23
NUP98P52948 AC018445.2-201ENST00000622987 260 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms