Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 FUNDC2P3-201ENST00000334716 533 ntBASIC6.73□□□□□ -1.33
NEK3P51956 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 RNA5SP188-201ENST00000362916 129 ntBASIC6.73□□□□□ -1.33
NEK3P51956 SNORA38B-201ENST00000363524 131 ntBASIC6.73□□□□□ -1.33
NEK3P51956 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.73□□□□□ -1.33
NEK3P51956 AL356057.1-202ENST00000402263 756 ntBASIC6.73□□□□□ -1.33
NEK3P51956 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.73□□□□□ -1.33
NEK3P51956 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.73□□□□□ -1.33
NEK3P51956 RPS7P12-201ENST00000422385 582 ntBASIC6.73□□□□□ -1.33
NEK3P51956 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.73□□□□□ -1.33
NEK3P51956 CLNS1AP1-201ENST00000435954 682 ntBASIC6.73□□□□□ -1.33
NEK3P51956 AC128677.1-201ENST00000436016 442 ntBASIC6.73□□□□□ -1.33
NEK3P51956 AL590762.3-201ENST00000436372 640 ntBASIC6.73□□□□□ -1.33
NEK3P51956 Z84478.1-201ENST00000438230 1219 ntBASIC6.73□□□□□ -1.33
NEK3P51956 AP000949.1-201ENST00000438328 629 ntBASIC6.73□□□□□ -1.33
NEK3P51956 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.73□□□□□ -1.33
NEK3P51956 AL161722.1-201ENST00000446972 1032 ntBASIC6.73□□□□□ -1.33
NEK3P51956 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.73□□□□□ -1.33
NEK3P51956 CYCSP53-201ENST00000455540 265 ntBASIC6.73□□□□□ -1.33
NEK3P51956 RBMY2HP-201ENST00000457961 720 ntBASIC6.73□□□□□ -1.33
NEK3P51956 LARP7P4-201ENST00000481075 878 ntBASIC6.73□□□□□ -1.33
NEK3P51956 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
NEK3P51956 RPL17P2-201ENST00000491913 451 ntBASIC6.73□□□□□ -1.33
NEK3P51956 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.73□□□□□ -1.33
NEK3P51956 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.73□□□□□ -1.33
NEK3P51956 AC106806.2-201ENST00000509365 500 ntBASIC6.73□□□□□ -1.33
NEK3P51956 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.73□□□□□ -1.33
NEK3P51956 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.73□□□□□ -1.33
NEK3P51956 HMGB1P46-201ENST00000520062 610 ntBASIC6.73□□□□□ -1.33
NEK3P51956 IGLV3-6-201ENST00000523937 250 ntBASIC6.73□□□□□ -1.33
NEK3P51956 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 OR4R2P-201ENST00000530815 597 ntBASIC6.73□□□□□ -1.33
NEK3P51956 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.73□□□□□ -1.33
NEK3P51956 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
NEK3P51956 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.73□□□□□ -1.33
NEK3P51956 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.73□□□□□ -1.33
NEK3P51956 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.73□□□□□ -1.33
NEK3P51956 HMGN2P47-201ENST00000559378 272 ntBASIC6.73□□□□□ -1.33
NEK3P51956 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.73□□□□□ -1.33
NEK3P51956 MIR4433B-201ENST00000581329 102 ntBASIC6.73□□□□□ -1.33
NEK3P51956 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.73□□□□□ -1.33
NEK3P51956 AC097467.4-201ENST00000605504 141 ntBASIC6.73□□□□□ -1.33
NEK3P51956 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.73□□□□□ -1.33
NEK3P51956 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.73□□□□□ -1.33
NEK3P51956 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.73□□□□□ -1.33
NEK3P51956 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 TMCC1P1-201ENST00000518897 1980 ntBASIC6.73□□□□□ -1.33
NEK3P51956 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
NEK3P51956 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NEK3P51956 KARSP1-201ENST00000451871 1752 ntBASIC6.72□□□□□ -1.33
NEK3P51956 LCOR-201ENST00000286067 4542 ntBASIC6.72□□□□□ -1.33
NEK3P51956 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NEK3P51956 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NEK3P51956 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NEK3P51956 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.72□□□□□ -1.33
NEK3P51956 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NEK3P51956 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.72□□□□□ -1.33
NEK3P51956 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NEK3P51956 SNORA64.3-201ENST00000365647 134 ntBASIC6.72□□□□□ -1.33
NEK3P51956 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NEK3P51956 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NEK3P51956 AL133260.1-201ENST00000405720 405 ntBASIC6.72□□□□□ -1.33
NEK3P51956 RPL12P23-201ENST00000405880 490 ntBASIC6.72□□□□□ -1.33
NEK3P51956 AC017035.1-201ENST00000411999 1115 ntBASIC6.72□□□□□ -1.33
NEK3P51956 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.72□□□□□ -1.33
NEK3P51956 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.72□□□□□ -1.33
NEK3P51956 HMGB3P10-201ENST00000434734 572 ntBASIC6.72□□□□□ -1.33
NEK3P51956 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.72□□□□□ -1.33
NEK3P51956 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
NEK3P51956 AC092106.2-201ENST00000436597 487 ntBASIC6.72□□□□□ -1.33
NEK3P51956 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.72□□□□□ -1.33
NEK3P51956 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.72□□□□□ -1.33
NEK3P51956 AC006326.1-201ENST00000445465 787 ntBASIC6.72□□□□□ -1.33
NEK3P51956 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.72□□□□□ -1.33
NEK3P51956 RPS7P10-201ENST00000464254 603 ntBASIC6.72□□□□□ -1.33
NEK3P51956 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.72□□□□□ -1.33
NEK3P51956 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NEK3P51956 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.72□□□□□ -1.33
NEK3P51956 OR52H2P-201ENST00000514607 902 ntBASIC6.72□□□□□ -1.33
NEK3P51956 AC034244.2-201ENST00000514668 858 ntBASIC6.72□□□□□ -1.33
NEK3P51956 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.72□□□□□ -1.33
NEK3P51956 AC027338.1-201ENST00000514840 825 ntBASIC6.72□□□□□ -1.33
NEK3P51956 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.72□□□□□ -1.33
NEK3P51956 AC022826.1-201ENST00000519383 805 ntBASIC6.72□□□□□ -1.33
NEK3P51956 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.72□□□□□ -1.33
NEK3P51956 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.72□□□□□ -1.33
NEK3P51956 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms