Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BRCA2P51587 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
BRCA2P51587 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 SAMM50P1-201ENST00000455403 1399 ntBASIC6.3□□□□□ -1.4
BRCA2P51587 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.3□□□□□ -1.4
BRCA2P51587 OR6D1P-201ENST00000436165 939 ntBASIC6.3□□□□□ -1.4
BRCA2P51587 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.3□□□□□ -1.4
BRCA2P51587 RPL23AP60-201ENST00000450011 454 ntBASIC6.3□□□□□ -1.4
BRCA2P51587 RN7SL51P-201ENST00000468230 285 ntBASIC6.3□□□□□ -1.4
BRCA2P51587 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
BRCA2P51587 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.3□□□□□ -1.4
BRCA2P51587 AC126615.2-201ENST00000553003 515 ntBASIC6.3□□□□□ -1.4
BRCA2P51587 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.3□□□□□ -1.4
BRCA2P51587 AC012414.7-202ENST00000622705 1090 ntBASIC6.3□□□□□ -1.4
BRCA2P51587 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.3□□□□□ -1.4
BRCA2P51587 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.3□□□□□ -1.4
BRCA2P51587 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
BRCA2P51587 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.3□□□□□ -1.4
BRCA2P51587 AC100871.1-201ENST00000507871 1456 ntBASIC6.3□□□□□ -1.4
BRCA2P51587 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
BRCA2P51587 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 OR55B1P-203ENST00000641518 2602 ntBASIC6.3□□□□□ -1.4
BRCA2P51587 IRF5P1-201ENST00000504852 2164 ntBASIC6.3□□□□□ -1.4
BRCA2P51587 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
BRCA2P51587 AC008937.3-201ENST00000606813 1700 ntBASIC6.3□□□□□ -1.4
BRCA2P51587 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
BRCA2P51587 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BRCA2P51587 AL389915.1-201ENST00000422463 466 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 AC044797.1-201ENST00000445744 679 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.29□□□□□ -1.4
BRCA2P51587 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.29□□□□□ -1.4
BRCA2P51587 AC091193.1-201ENST00000604640 448 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 CYP4F35P-202ENST00000636121 390 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BRCA2P51587 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BRCA2P51587 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.29□□□□□ -1.4
BRCA2P51587 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.29□□□□□ -1.4
BRCA2P51587 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCA2P51587 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BRCA2P51587 RNA5SP478-201ENST00000364657 115 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCA2P51587 VDAC2P4-201ENST00000452925 711 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 OR11I1P-201ENST00000486033 954 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 SSX8-201ENST00000506270 579 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 BTF3P13-201ENST00000513224 490 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.29□□□□□ -1.4
BRCA2P51587 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.29□□□□□ -1.4
BRCA2P51587 AC024255.1-201ENST00000614376 102 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
BRCA2P51587 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
BRCA2P51587 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
BRCA2P51587 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
BRCA2P51587 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BRCA2P51587 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.29□□□□□ -1.4
BRCA2P51587 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
BRCA2P51587 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
BRCA2P51587 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.29□□□□□ -1.4
BRCA2P51587 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.29□□□□□ -1.4
BRCA2P51587 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
BRCA2P51587 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.29□□□□□ -1.4
BRCA2P51587 AC034205.1-201ENST00000520621 638 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 AC069307.1-201ENST00000602820 447 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 AC145423.1-201ENST00000605712 336 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.29□□□□□ -1.4
BRCA2P51587 AOX3P-204ENST00000491025 2107 ntBASIC6.29□□□□□ -1.4
BRCA2P51587 TACR1-201ENST00000305249 4959 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
BRCA2P51587 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
BRCA2P51587 AC022164.1-201ENST00000568767 2673 ntBASIC6.28□□□□□ -1.4
BRCA2P51587 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
BRCA2P51587 COX6B1P1-201ENST00000415962 213 ntBASIC6.28□□□□□ -1.4
BRCA2P51587 MGAT2P2-201ENST00000427194 797 ntBASIC6.28□□□□□ -1.4
BRCA2P51587 MGAT2P1-201ENST00000449718 797 ntBASIC6.28□□□□□ -1.4
BRCA2P51587 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.28□□□□□ -1.4
BRCA2P51587 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.28□□□□□ -1.4
BRCA2P51587 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
BRCA2P51587 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.28□□□□□ -1.4
BRCA2P51587 AP001521.2-201ENST00000608772 546 ntBASIC6.28□□□□□ -1.4
BRCA2P51587 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.28□□□□□ -1.4
BRCA2P51587 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.28□□□□□ -1.4
BRCA2P51587 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
BRCA2P51587 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
BRCA2P51587 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
BRCA2P51587 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
BRCA2P51587 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
BRCA2P51587 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
BRCA2P51587 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
BRCA2P51587 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
BRCA2P51587 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
BRCA2P51587 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.28□□□□□ -1.4
BRCA2P51587 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
BRCA2P51587 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
BRCA2P51587 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms