Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AP001885.1-201ENST00000621658 558 ntBASIC6.95□□□□□ -1.3
CIITAP33076 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.95□□□□□ -1.3
CIITAP33076 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.95□□□□□ -1.3
CIITAP33076 CCNT2P1-201ENST00000423082 1315 ntBASIC6.95□□□□□ -1.3
CIITAP33076 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CIITAP33076 AC024587.1-201ENST00000505925 2157 ntBASIC6.95□□□□□ -1.3
CIITAP33076 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.95□□□□□ -1.3
CIITAP33076 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
CIITAP33076 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 CAP1P2-201ENST00000417455 1409 ntBASIC6.94□□□□□ -1.3
CIITAP33076 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.94□□□□□ -1.3
CIITAP33076 ZNF658B-201ENST00000602828 3408 ntBASIC6.94□□□□□ -1.3
CIITAP33076 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
CIITAP33076 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.94□□□□□ -1.3
CIITAP33076 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CIITAP33076 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.94□□□□□ -1.3
CIITAP33076 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.94□□□□□ -1.3
CIITAP33076 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CIITAP33076 RNU105B-201ENST00000364478 208 ntBASIC6.94□□□□□ -1.3
CIITAP33076 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.94□□□□□ -1.3
CIITAP33076 AC245096.1-201ENST00000413104 546 ntBASIC6.94□□□□□ -1.3
CIITAP33076 AL096829.1-201ENST00000413677 457 ntBASIC6.94□□□□□ -1.3
CIITAP33076 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.94□□□□□ -1.3
CIITAP33076 RPS15AP30-201ENST00000420976 390 ntBASIC6.94□□□□□ -1.3
CIITAP33076 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.94□□□□□ -1.3
CIITAP33076 AMYP1-201ENST00000440059 1023 ntBASIC6.94□□□□□ -1.3
CIITAP33076 RPL6P30-201ENST00000443382 862 ntBASIC6.94□□□□□ -1.3
CIITAP33076 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.94□□□□□ -1.3
CIITAP33076 PPIAP27-201ENST00000453800 265 ntBASIC6.94□□□□□ -1.3
CIITAP33076 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.94□□□□□ -1.3
CIITAP33076 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.94□□□□□ -1.3
CIITAP33076 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.94□□□□□ -1.3
CIITAP33076 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.94□□□□□ -1.3
CIITAP33076 AC005363.1-201ENST00000530779 351 ntBASIC6.94□□□□□ -1.3
CIITAP33076 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.94□□□□□ -1.3
CIITAP33076 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.94□□□□□ -1.3
CIITAP33076 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.94□□□□□ -1.3
CIITAP33076 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.94□□□□□ -1.3
CIITAP33076 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.94□□□□□ -1.3
CIITAP33076 AC092681.3-201ENST00000609463 678 ntBASIC6.94□□□□□ -1.3
CIITAP33076 RN7SL261P-201ENST00000613441 282 ntBASIC6.94□□□□□ -1.3
CIITAP33076 AC004801.6-201ENST00000616571 978 ntBASIC6.94□□□□□ -1.3
CIITAP33076 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.94□□□□□ -1.3
CIITAP33076 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CIITAP33076 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CIITAP33076 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CIITAP33076 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.94□□□□□ -1.3
CIITAP33076 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CIITAP33076 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
CIITAP33076 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.94□□□□□ -1.3
CIITAP33076 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CIITAP33076 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.93□□□□□ -1.3
CIITAP33076 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CIITAP33076 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CIITAP33076 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CIITAP33076 AC006511.3-201ENST00000624929 1783 ntBASIC6.93□□□□□ -1.3
CIITAP33076 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CIITAP33076 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CIITAP33076 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.93□□□□□ -1.3
CIITAP33076 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CIITAP33076 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.93□□□□□ -1.3
CIITAP33076 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
CIITAP33076 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CIITAP33076 RN7SKP275-201ENST00000364626 301 ntBASIC6.93□□□□□ -1.3
CIITAP33076 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.93□□□□□ -1.3
CIITAP33076 AL096711.1-201ENST00000404780 554 ntBASIC6.93□□□□□ -1.3
CIITAP33076 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.93□□□□□ -1.3
CIITAP33076 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.93□□□□□ -1.3
CIITAP33076 HMGA1P8-201ENST00000414130 321 ntBASIC6.93□□□□□ -1.3
CIITAP33076 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.93□□□□□ -1.3
CIITAP33076 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.93□□□□□ -1.3
CIITAP33076 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.93□□□□□ -1.3
CIITAP33076 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.93□□□□□ -1.3
CIITAP33076 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.93□□□□□ -1.3
CIITAP33076 FTLP8-201ENST00000446770 267 ntBASIC6.93□□□□□ -1.3
CIITAP33076 RPL23AP60-201ENST00000450011 454 ntBASIC6.93□□□□□ -1.3
CIITAP33076 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.93□□□□□ -1.3
CIITAP33076 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.93□□□□□ -1.3
CIITAP33076 RNU6-551P-201ENST00000516661 103 ntBASIC6.93□□□□□ -1.3
CIITAP33076 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.93□□□□□ -1.3
CIITAP33076 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CIITAP33076 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.93□□□□□ -1.3
CIITAP33076 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.93□□□□□ -1.3
CIITAP33076 AC090115.2-201ENST00000548060 883 ntBASIC6.93□□□□□ -1.3
CIITAP33076 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.93□□□□□ -1.3
CIITAP33076 CYCSP38-201ENST00000559840 322 ntBASIC6.93□□□□□ -1.3
CIITAP33076 AC008507.3-201ENST00000585753 472 ntBASIC6.93□□□□□ -1.3
CIITAP33076 AC073333.2-201ENST00000603589 769 ntBASIC6.93□□□□□ -1.3
CIITAP33076 AL357562.1-201ENST00000624911 609 ntBASIC6.93□□□□□ -1.3
CIITAP33076 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CIITAP33076 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
CIITAP33076 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CIITAP33076 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CIITAP33076 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms