Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
COL8A2P25067 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.17□□□□□ -1.58
COL8A2P25067 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL8A2P25067 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.16□□□□□ -1.58
COL8A2P25067 CASC19-238ENST00000641523 1558 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.16□□□□□ -1.58
COL8A2P25067 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL8A2P25067 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.16□□□□□ -1.58
COL8A2P25067 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.16□□□□□ -1.58
COL8A2P25067 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
COL8A2P25067 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
COL8A2P25067 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COL8A2P25067 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.16□□□□□ -1.58
COL8A2P25067 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL8A2P25067 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL8A2P25067 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COL8A2P25067 RNU11-6P-201ENST00000391127 133 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
COL8A2P25067 HMGN1P20-201ENST00000411849 300 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.16□□□□□ -1.58
COL8A2P25067 CDY8P-201ENST00000428380 1279 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.16□□□□□ -1.58
COL8A2P25067 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.16□□□□□ -1.58
COL8A2P25067 CDY20P-201ENST00000447528 1279 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 AL359839.1-201ENST00000451975 1160 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL8A2P25067 UGT2A3P7-201ENST00000510485 734 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.16□□□□□ -1.58
COL8A2P25067 AP003396.4-201ENST00000527574 265 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.16□□□□□ -1.58
COL8A2P25067 RPA2P1-201ENST00000556557 721 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
COL8A2P25067 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.16□□□□□ -1.58
COL8A2P25067 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.16□□□□□ -1.58
COL8A2P25067 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.16□□□□□ -1.58
COL8A2P25067 MIR3189-201ENST00000578735 73 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.16□□□□□ -1.58
COL8A2P25067 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.16□□□□□ -1.58
COL8A2P25067 AL645933.2-201ENST00000606743 1207 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 AC141002.1-201ENST00000607025 279 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
COL8A2P25067 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.16□□□□□ -1.58
COL8A2P25067 AL137067.2-201ENST00000621202 131 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 FO681491.1-202ENST00000623392 737 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL8A2P25067 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL8A2P25067 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL8A2P25067 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL8A2P25067 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL8A2P25067 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
COL8A2P25067 AC097634.1-201ENST00000604491 2467 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 AC011815.2-201ENST00000618230 2021 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 AC011369.2-201ENST00000624423 1567 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL8A2P25067 DOCK11P1-201ENST00000553480 5932 ntBASIC5.16□□□□□ -1.58
COL8A2P25067 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.16□□□□□ -1.58
COL8A2P25067 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
COL8A2P25067 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL8A2P25067 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.15□□□□□ -1.58
COL8A2P25067 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL8A2P25067 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.15□□□□□ -1.58
COL8A2P25067 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
COL8A2P25067 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL8A2P25067 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL8A2P25067 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.15□□□□□ -1.58
COL8A2P25067 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL8A2P25067 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL8A2P25067 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL8A2P25067 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.15□□□□□ -1.58
COL8A2P25067 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL8A2P25067 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL8A2P25067 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL8A2P25067 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
COL8A2P25067 RNA5SP273-201ENST00000362484 113 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 RNA5SP477-201ENST00000362639 119 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 AL451142.1-201ENST00000375867 775 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 SUGT1P2-201ENST00000379452 992 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 SSR1P1-201ENST00000407630 814 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 AL353626.3-201ENST00000413399 657 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 SLC20A1P1-201ENST00000413906 956 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 MTND4LP17-201ENST00000414607 293 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.15□□□□□ -1.59
COL8A2P25067 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.15□□□□□ -1.59
COL8A2P25067 RPS7P8-201ENST00000418311 581 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.15□□□□□ -1.59
COL8A2P25067 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.15□□□□□ -1.59
COL8A2P25067 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.15□□□□□ -1.59
COL8A2P25067 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL8A2P25067 AC005077.1-201ENST00000449226 375 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 AC016724.1-201ENST00000453215 421 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.15□□□□□ -1.59
COL8A2P25067 RNA5SP438-201ENST00000516561 112 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 RPA2P3-201ENST00000533268 770 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.15□□□□□ -1.59
COL8A2P25067 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.15□□□□□ -1.59
COL8A2P25067 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.15□□□□□ -1.59
COL8A2P25067 RNU4ATAC-201ENST00000580972 127 ntBASIC5.15□□□□□ -1.59
COL8A2P25067 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms