Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL031651.1-201ENST00000615357 1438 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 AC027279.1-201ENST00000568885 4284 ntBASIC8.11□□□□□ -1.11
ERCC3P19447 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
ERCC3P19447 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
ERCC3P19447 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
ERCC3P19447 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.11□□□□□ -1.11
ERCC3P19447 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
ERCC3P19447 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
ERCC3P19447 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC8.1□□□□□ -1.11
ERCC3P19447 ZNF849P-201ENST00000594711 1566 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.1□□□□□ -1.11
ERCC3P19447 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 CD2-201ENST00000369477 478 ntTSL 2 BASIC8.1□□□□□ -1.11
ERCC3P19447 PPCS-201ENST00000372556 984 ntTSL 2 BASIC8.1□□□□□ -1.11
ERCC3P19447 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.1□□□□□ -1.11
ERCC3P19447 CHMP1B2P-201ENST00000399581 597 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 AL021331.1-201ENST00000402817 582 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.1□□□□□ -1.11
ERCC3P19447 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC8.1□□□□□ -1.11
ERCC3P19447 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC8.1□□□□□ -1.11
ERCC3P19447 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.1□□□□□ -1.11
ERCC3P19447 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC8.1□□□□□ -1.11
ERCC3P19447 AC018804.1-201ENST00000430381 618 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 ETF1P3-201ENST00000430422 1160 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC8.1□□□□□ -1.11
ERCC3P19447 AC092647.3-201ENST00000443044 633 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 AL031681.1-201ENST00000443304 400 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 OR2L9P-201ENST00000444456 913 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.1□□□□□ -1.11
ERCC3P19447 CCNJP1-201ENST00000450600 1149 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC8.1□□□□□ -1.11
ERCC3P19447 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC8.1□□□□□ -1.11
ERCC3P19447 RN7SL83P-201ENST00000468131 297 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 PPP1R2P6-201ENST00000478565 588 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 AC098818.1-201ENST00000478593 252 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 RN7SL88P-201ENST00000480166 299 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.1□□□□□ -1.11
ERCC3P19447 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC8.1□□□□□ -1.11
ERCC3P19447 B3GNTL1P1-201ENST00000509174 289 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 AC138517.1-201ENST00000515724 568 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC8.1□□□□□ -1.11
ERCC3P19447 AC104417.1-201ENST00000523974 751 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 OR7E154P-201ENST00000525174 932 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 OR9G2P-201ENST00000533326 880 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC8.1□□□□□ -1.11
ERCC3P19447 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC8.1□□□□□ -1.11
ERCC3P19447 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC8.1□□□□□ -1.11
ERCC3P19447 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC8.1□□□□□ -1.11
ERCC3P19447 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC8.1□□□□□ -1.11
ERCC3P19447 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC8.1□□□□□ -1.11
ERCC3P19447 AC087897.1-201ENST00000550134 156 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 GARSP1-201ENST00000570895 719 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 AC096708.2-201ENST00000577676 512 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 AC008536.1-201ENST00000602872 669 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 AC079610.2-201ENST00000604818 690 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC8.1□□□□□ -1.11
ERCC3P19447 AC010435.1-201ENST00000623353 1177 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 AL357140.4-201ENST00000636827 412 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.1□□□□□ -1.11
ERCC3P19447 MTND5P23-201ENST00000430812 1655 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 AC061975.5-201ENST00000584928 1441 ntBASIC8.1□□□□□ -1.11
ERCC3P19447 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC8.1□□□□□ -1.11
ERCC3P19447 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
ERCC3P19447 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.1□□□□□ -1.11
ERCC3P19447 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.1□□□□□ -1.11
ERCC3P19447 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ERCC3P19447 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
ERCC3P19447 AC022507.1-201ENST00000548349 1505 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 CIR1P2-201ENST00000514821 1342 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC8.09□□□□□ -1.11
ERCC3P19447 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
ERCC3P19447 NF1P8-201ENST00000415351 1461 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 MKI67P1-201ENST00000604297 1460 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
ERCC3P19447 RNA5SP382-201ENST00000363355 112 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 RN7SKP130-201ENST00000364924 301 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 RN7SKP189-201ENST00000365042 330 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC8.09□□□□□ -1.11
ERCC3P19447 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
ERCC3P19447 MCTS2P-201ENST00000394552 546 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 AL121977.1-201ENST00000401636 979 ntBASIC8.09□□□□□ -1.11
ERCC3P19447 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms