Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.45□□□□□ -1.06
ATF3P18847 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC8.44□□□□□ -1.06
ATF3P18847 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.44□□□□□ -1.06
ATF3P18847 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ATF3P18847 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ATF3P18847 RN7SKP115-201ENST00000363177 317 ntBASIC8.44□□□□□ -1.06
ATF3P18847 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
ATF3P18847 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC8.44□□□□□ -1.06
ATF3P18847 UBE2V2P3-201ENST00000433562 437 ntBASIC8.44□□□□□ -1.06
ATF3P18847 H2AFZP6-201ENST00000444403 394 ntBASIC8.44□□□□□ -1.06
ATF3P18847 AC023245.1-201ENST00000468501 517 ntBASIC8.44□□□□□ -1.06
ATF3P18847 RN7SL30P-201ENST00000488416 306 ntBASIC8.44□□□□□ -1.06
ATF3P18847 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ATF3P18847 CDH12P4-201ENST00000517835 295 ntBASIC8.44□□□□□ -1.06
ATF3P18847 CDH12P3-201ENST00000517935 295 ntBASIC8.44□□□□□ -1.06
ATF3P18847 CDH12P1-201ENST00000518435 295 ntBASIC8.44□□□□□ -1.06
ATF3P18847 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC8.44□□□□□ -1.06
ATF3P18847 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.44□□□□□ -1.06
ATF3P18847 NF1P10-201ENST00000613227 742 ntBASIC8.44□□□□□ -1.06
ATF3P18847 RN7SL544P-201ENST00000617232 284 ntBASIC8.44□□□□□ -1.06
ATF3P18847 RN7SL763P-201ENST00000620922 284 ntBASIC8.44□□□□□ -1.06
ATF3P18847 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ATF3P18847 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ATF3P18847 NBPF8-201ENST00000583271 5330 ntBASIC8.44□□□□□ -1.06
ATF3P18847 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
ATF3P18847 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.44□□□□□ -1.06
ATF3P18847 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
ATF3P18847 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
ATF3P18847 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ATF3P18847 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.43□□□□□ -1.06
ATF3P18847 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.43□□□□□ -1.06
ATF3P18847 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ATF3P18847 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.43□□□□□ -1.06
ATF3P18847 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
ATF3P18847 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ATF3P18847 MTHFD2P5-201ENST00000320415 844 ntBASIC8.43□□□□□ -1.06
ATF3P18847 SELENOWP1-201ENST00000322792 252 ntBASIC8.43□□□□□ -1.06
ATF3P18847 AL445238.1-204ENST00000400311 463 ntBASIC8.43□□□□□ -1.06
ATF3P18847 AC016739.1-201ENST00000405359 345 ntBASIC8.43□□□□□ -1.06
ATF3P18847 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC8.43□□□□□ -1.06
ATF3P18847 AK4P4-201ENST00000419465 646 ntBASIC8.43□□□□□ -1.06
ATF3P18847 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC8.43□□□□□ -1.06
ATF3P18847 AC016027.4-201ENST00000450866 277 ntBASIC8.43□□□□□ -1.06
ATF3P18847 OR7L1P-201ENST00000456181 380 ntBASIC8.43□□□□□ -1.06
ATF3P18847 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC8.43□□□□□ -1.06
ATF3P18847 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
ATF3P18847 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8.43□□□□□ -1.06
ATF3P18847 OR2AO1P-201ENST00000476497 403 ntBASIC8.43□□□□□ -1.06
ATF3P18847 AC114728.1-201ENST00000488289 483 ntBASIC8.43□□□□□ -1.06
ATF3P18847 SNORA43.3-201ENST00000517240 103 ntBASIC8.43□□□□□ -1.06
ATF3P18847 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.43□□□□□ -1.06
ATF3P18847 OR4A46P-201ENST00000527255 933 ntBASIC8.43□□□□□ -1.06
ATF3P18847 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC8.43□□□□□ -1.06
ATF3P18847 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC8.43□□□□□ -1.06
ATF3P18847 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC8.43□□□□□ -1.06
ATF3P18847 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC8.43□□□□□ -1.06
ATF3P18847 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC8.43□□□□□ -1.06
ATF3P18847 AL021918.2-201ENST00000613415 194 ntBASIC8.43□□□□□ -1.06
ATF3P18847 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC8.43□□□□□ -1.06
ATF3P18847 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC8.43□□□□□ -1.06
ATF3P18847 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC8.43□□□□□ -1.06
ATF3P18847 AC087565.3-203ENST00000641018 837 ntBASIC8.43□□□□□ -1.06
ATF3P18847 AC233968.1-201ENST00000611212 1300 ntBASIC8.43□□□□□ -1.06
ATF3P18847 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ATF3P18847 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ATF3P18847 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
ATF3P18847 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ATF3P18847 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
ATF3P18847 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
ATF3P18847 USP46-202ENST00000451218 4622 ntTSL 5 BASIC8.42□□□□□ -1.06
ATF3P18847 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ATF3P18847 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ATF3P18847 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
ATF3P18847 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
ATF3P18847 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ATF3P18847 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
ATF3P18847 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ATF3P18847 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.42□□□□□ -1.06
ATF3P18847 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ATF3P18847 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ATF3P18847 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
ATF3P18847 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC8.42□□□□□ -1.06
ATF3P18847 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
ATF3P18847 SNRPEP6-201ENST00000407465 277 ntBASIC8.42□□□□□ -1.06
ATF3P18847 AL596448.1-201ENST00000415024 392 ntBASIC8.42□□□□□ -1.06
ATF3P18847 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC8.42□□□□□ -1.06
ATF3P18847 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC8.42□□□□□ -1.06
ATF3P18847 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC8.42□□□□□ -1.06
ATF3P18847 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
ATF3P18847 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC8.42□□□□□ -1.06
ATF3P18847 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC8.42□□□□□ -1.06
ATF3P18847 HMGN2P36-201ENST00000529541 409 ntBASIC8.42□□□□□ -1.06
ATF3P18847 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.42□□□□□ -1.06
ATF3P18847 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC8.42□□□□□ -1.06
ATF3P18847 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC8.42□□□□□ -1.06
ATF3P18847 FKBP1AP1-201ENST00000594588 318 ntBASIC8.42□□□□□ -1.06
ATF3P18847 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC8.42□□□□□ -1.06
ATF3P18847 AC010615.3-201ENST00000597319 394 ntBASIC8.42□□□□□ -1.06
ATF3P18847 HCG18-243ENST00000602498 327 ntTSL 3 BASIC8.42□□□□□ -1.06
ATF3P18847 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms