Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC011369.2-201ENST00000624423 1567 ntBASIC10.06□□□□□ -0.8
CFTRP13569 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CFTRP13569 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC10.05□□□□□ -0.8
CFTRP13569 ELOCP3-201ENST00000439303 348 ntBASIC10.05□□□□□ -0.8
CFTRP13569 AL663074.2-201ENST00000440621 479 ntBASIC10.05□□□□□ -0.8
CFTRP13569 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC10.05□□□□□ -0.8
CFTRP13569 AC112187.1-201ENST00000455837 479 ntBASIC10.05□□□□□ -0.8
CFTRP13569 RPL38P3-201ENST00000484463 213 ntBASIC10.05□□□□□ -0.8
CFTRP13569 AL049779.2-201ENST00000553847 315 ntBASIC10.05□□□□□ -0.8
CFTRP13569 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC10.05□□□□□ -0.8
CFTRP13569 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC10.05□□□□□ -0.8
CFTRP13569 TAS2R6P-201ENST00000605022 826 ntBASIC10.05□□□□□ -0.8
CFTRP13569 AC133644.2-201ENST00000608142 540 ntBASIC10.05□□□□□ -0.8
CFTRP13569 AP001784.1-201ENST00000624107 428 ntBASIC10.05□□□□□ -0.8
CFTRP13569 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CFTRP13569 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
CFTRP13569 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CFTRP13569 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
CFTRP13569 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC10.05□□□□□ -0.8
CFTRP13569 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC10.05□□□□□ -0.8
CFTRP13569 Z82209.2-201ENST00000623410 2012 ntBASIC10.05□□□□□ -0.8
CFTRP13569 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CFTRP13569 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC10.05□□□□□ -0.8
CFTRP13569 AL590004.4-201ENST00000566733 7060 ntBASIC10.05□□□□□ -0.8
CFTRP13569 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
CFTRP13569 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CFTRP13569 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC10.05□□□□□ -0.8
CFTRP13569 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CFTRP13569 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC10.05□□□□□ -0.8
CFTRP13569 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CFTRP13569 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CFTRP13569 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CFTRP13569 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
CFTRP13569 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CFTRP13569 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
CFTRP13569 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC10.04□□□□□ -0.8
CFTRP13569 AL035090.1-201ENST00000454835 332 ntBASIC10.04□□□□□ -0.8
CFTRP13569 AC090638.1-201ENST00000498296 909 ntBASIC10.04□□□□□ -0.8
CFTRP13569 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC10.04□□□□□ -0.8
CFTRP13569 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
CFTRP13569 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC10.04□□□□□ -0.8
CFTRP13569 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CFTRP13569 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CFTRP13569 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC10.04□□□□□ -0.8
CFTRP13569 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CFTRP13569 SELE-203ENST00000367775 3389 ntTSL 5 BASIC10.04□□□□□ -0.8
CFTRP13569 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
CFTRP13569 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC10.04□□□□□ -0.8
CFTRP13569 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CFTRP13569 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
CFTRP13569 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
CFTRP13569 AC105749.1-201ENST00000631338 2008 ntBASIC10.04□□□□□ -0.8
CFTRP13569 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
CFTRP13569 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC10.04□□□□□ -0.8
CFTRP13569 RPS26P13-201ENST00000419030 330 ntBASIC10.04□□□□□ -0.8
CFTRP13569 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CFTRP13569 VDAC2P4-201ENST00000452925 711 ntBASIC10.04□□□□□ -0.8
CFTRP13569 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC10.04□□□□□ -0.8
CFTRP13569 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC10.04□□□□□ -0.8
CFTRP13569 RNA5SP228-201ENST00000516232 133 ntBASIC10.04□□□□□ -0.8
CFTRP13569 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC10.04□□□□□ -0.8
CFTRP13569 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC10.04□□□□□ -0.8
CFTRP13569 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
CFTRP13569 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC10.04□□□□□ -0.8
CFTRP13569 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
CFTRP13569 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
CFTRP13569 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CFTRP13569 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
CFTRP13569 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CFTRP13569 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CFTRP13569 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
CFTRP13569 ERG-205ENST00000398910 4954 ntTSL 5 BASIC10.03□□□□□ -0.8
CFTRP13569 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CFTRP13569 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
CFTRP13569 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CFTRP13569 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CFTRP13569 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CFTRP13569 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
CFTRP13569 RNA5SP339-201ENST00000390987 122 ntBASIC10.03□□□□□ -0.8
CFTRP13569 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC10.03□□□□□ -0.8
CFTRP13569 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC10.03□□□□□ -0.8
CFTRP13569 RPL7L1P9-201ENST00000431298 745 ntBASIC10.03□□□□□ -0.8
CFTRP13569 AC015983.1-201ENST00000441577 373 ntBASIC10.03□□□□□ -0.8
CFTRP13569 AC099521.1-201ENST00000482557 334 ntBASIC10.03□□□□□ -0.8
CFTRP13569 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
CFTRP13569 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC10.03□□□□□ -0.8
CFTRP13569 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC10.03□□□□□ -0.8
CFTRP13569 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC10.03□□□□□ -0.8
CFTRP13569 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC10.03□□□□□ -0.8
CFTRP13569 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CFTRP13569 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
CFTRP13569 AL031595.3-201ENST00000624919 14262 ntBASIC10.03□□□□□ -0.8
CFTRP13569 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
CFTRP13569 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC10.02□□□□□ -0.8
CFTRP13569 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
CFTRP13569 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CFTRP13569 FTO-215ENST00000636491 1676 ntTSL 5 BASIC10.02□□□□□ -0.81
CFTRP13569 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC10.02□□□□□ -0.81
CFTRP13569 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CFTRP13569 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms