Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
COL6A2P12110 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COL6A2P12110 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.79□□□□□ -1.32
COL6A2P12110 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.79□□□□□ -1.32
COL6A2P12110 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.79□□□□□ -1.32
COL6A2P12110 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.79□□□□□ -1.32
COL6A2P12110 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL6A2P12110 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
COL6A2P12110 PARP4P1-201ENST00000435945 2337 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
COL6A2P12110 AC096992.2-201ENST00000609553 1684 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 AC007485.2-201ENST00000623493 1667 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
COL6A2P12110 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
COL6A2P12110 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 OR2M1P-201ENST00000318104 951 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.78□□□□□ -1.32
COL6A2P12110 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
COL6A2P12110 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC6.78□□□□□ -1.32
COL6A2P12110 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.78□□□□□ -1.32
COL6A2P12110 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL6A2P12110 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.78□□□□□ -1.32
COL6A2P12110 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.78□□□□□ -1.32
COL6A2P12110 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
COL6A2P12110 AC245452.2-201ENST00000435222 392 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.78□□□□□ -1.32
COL6A2P12110 MTND4P32-201ENST00000437189 1237 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.78□□□□□ -1.32
COL6A2P12110 DBIL5P2-201ENST00000443827 253 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.78□□□□□ -1.32
COL6A2P12110 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.78□□□□□ -1.32
COL6A2P12110 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.78□□□□□ -1.32
COL6A2P12110 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.78□□□□□ -1.32
COL6A2P12110 RN7SL379P-201ENST00000479912 293 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 AC091435.1-201ENST00000505442 584 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.78□□□□□ -1.32
COL6A2P12110 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.78□□□□□ -1.32
COL6A2P12110 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.78□□□□□ -1.32
COL6A2P12110 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.78□□□□□ -1.32
COL6A2P12110 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.78□□□□□ -1.32
COL6A2P12110 AC023050.2-201ENST00000544968 387 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 AL109628.1-201ENST00000556877 366 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.78□□□□□ -1.32
COL6A2P12110 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.78□□□□□ -1.32
COL6A2P12110 AC025283.1-201ENST00000572039 734 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.78□□□□□ -1.32
COL6A2P12110 VN1R78P-201ENST00000597393 564 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.78□□□□□ -1.32
COL6A2P12110 Z82195.1-201ENST00000604558 398 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 AL136139.1-201ENST00000605568 222 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 AC005021.1-201ENST00000608730 355 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 AC007204.1-201ENST00000621794 555 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.78□□□□□ -1.32
COL6A2P12110 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.78□□□□□ -1.32
COL6A2P12110 AC090897.3-201ENST00000636973 1157 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 CASC19-274ENST00000642018 970 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.78□□□□□ -1.32
COL6A2P12110 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.78□□□□□ -1.32
COL6A2P12110 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL6A2P12110 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.78□□□□□ -1.32
COL6A2P12110 AL136531.3-201ENST00000624378 3658 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL6A2P12110 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL6A2P12110 AKAP17BP-201ENST00000431706 2719 ntBASIC6.78□□□□□ -1.32
COL6A2P12110 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
COL6A2P12110 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
COL6A2P12110 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
COL6A2P12110 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.77□□□□□ -1.32
COL6A2P12110 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.77□□□□□ -1.33
COL6A2P12110 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
COL6A2P12110 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
COL6A2P12110 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
COL6A2P12110 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.77□□□□□ -1.33
COL6A2P12110 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.77□□□□□ -1.33
COL6A2P12110 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL6A2P12110 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL6A2P12110 MTHFD2P5-201ENST00000320415 844 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 RNU6-1251P-201ENST00000364502 107 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 PPIAP26-201ENST00000377951 522 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 TYMSP1-201ENST00000407851 869 ntBASIC6.77□□□□□ -1.33
COL6A2P12110 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.77□□□□□ -1.33
COL6A2P12110 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms