Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-DOAP06340 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 UGT2B27P-201ENST00000505092 1620 ntBASIC7.31□□□□□ -1.24
HLA-DOAP06340 AC009135.2-201ENST00000624136 1768 ntBASIC7.31□□□□□ -1.24
HLA-DOAP06340 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-DOAP06340 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-DOAP06340 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 OR7E25P-201ENST00000344844 931 ntBASIC7.31□□□□□ -1.24
HLA-DOAP06340 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 SLC20A1P1-201ENST00000413906 956 ntBASIC7.31□□□□□ -1.24
HLA-DOAP06340 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 CYP4F30P-202ENST00000420048 405 ntBASIC7.31□□□□□ -1.24
HLA-DOAP06340 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 GXYLT1P1-201ENST00000446657 490 ntBASIC7.31□□□□□ -1.24
HLA-DOAP06340 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 RPA2P3-201ENST00000533268 770 ntBASIC7.31□□□□□ -1.24
HLA-DOAP06340 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 AC027229.1-201ENST00000583887 253 ntBASIC7.31□□□□□ -1.24
HLA-DOAP06340 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
HLA-DOAP06340 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
HLA-DOAP06340 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-DOAP06340 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-DOAP06340 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-DOAP06340 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-DOAP06340 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-DOAP06340 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 RNA5SP477-201ENST00000362639 119 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 RNU11-6P-201ENST00000391127 133 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 HMGB1P32-201ENST00000425971 565 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 AC244033.1-201ENST00000426826 870 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 AC005077.1-201ENST00000449226 375 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 AC092865.4-201ENST00000477936 615 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 SCARNA18.1-201ENST00000516330 83 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 RNA5SP271-201ENST00000516700 88 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 AC026688.1-201ENST00000520639 1168 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-DOAP06340 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-DOAP06340 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 AC008521.2-201ENST00000591021 259 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 AC034229.4-201ENST00000607861 441 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 AL391597.1-201ENST00000618707 694 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 AL357153.4-201ENST00000620487 1016 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-DOAP06340 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.3□□□□□ -1.24
HLA-DOAP06340 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-DOAP06340 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-DOAP06340 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-DOAP06340 BIN2P1-201ENST00000504996 1530 ntBASIC7.3□□□□□ -1.24
HLA-DOAP06340 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-DOAP06340 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
HLA-DOAP06340 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 DOCK11P1-201ENST00000553480 5932 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.29□□□□□ -1.24
HLA-DOAP06340 MTND5P12-201ENST00000502851 1449 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 AC092821.3-202ENST00000641304 2767 ntBASIC7.29□□□□□ -1.24
HLA-DOAP06340 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
HLA-DOAP06340 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms