Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 SNORA17.1-201ENST00000362945 126 ntBASIC3.58□□□□□ -1.84
APOBP04114 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 RPS23P9-201ENST00000448848 438 ntBASIC3.58□□□□□ -1.84
APOBP04114 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.58□□□□□ -1.84
APOBP04114 RNU6-941P-201ENST00000516346 108 ntBASIC3.58□□□□□ -1.84
APOBP04114 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.58□□□□□ -1.84
APOBP04114 AC011447.4-201ENST00000587562 111 ntBASIC3.58□□□□□ -1.84
APOBP04114 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 AC012616.1-201ENST00000600294 197 ntBASIC3.58□□□□□ -1.84
APOBP04114 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.58□□□□□ -1.84
APOBP04114 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
APOBP04114 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
APOBP04114 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.58□□□□□ -1.84
APOBP04114 AC004129.2-201ENST00000457229 287 ntBASIC3.58□□□□□ -1.84
APOBP04114 OR13C1P-201ENST00000457612 963 ntBASIC3.58□□□□□ -1.84
APOBP04114 AC007537.2-201ENST00000472093 511 ntBASIC3.58□□□□□ -1.84
APOBP04114 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 AL162456.1-201ENST00000634535 2006 ntBASIC3.58□□□□□ -1.84
APOBP04114 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 UGT2B27P-201ENST00000505092 1620 ntBASIC3.58□□□□□ -1.84
APOBP04114 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC3.58□□□□□ -1.84
APOBP04114 RNA5SP335-201ENST00000363817 110 ntBASIC3.58□□□□□ -1.84
APOBP04114 RN7SKP113-201ENST00000363891 295 ntBASIC3.58□□□□□ -1.84
APOBP04114 MGAT2P2-201ENST00000427194 797 ntBASIC3.58□□□□□ -1.84
APOBP04114 MORF4L1P5-201ENST00000433352 961 ntBASIC3.58□□□□□ -1.84
APOBP04114 SNRPCP2-201ENST00000504370 475 ntBASIC3.58□□□□□ -1.84
APOBP04114 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC3.58□□□□□ -1.84
APOBP04114 AC127381.1-201ENST00000555979 939 ntBASIC3.58□□□□□ -1.84
APOBP04114 MIR5096-201ENST00000583713 70 ntBASIC3.58□□□□□ -1.84
APOBP04114 AC068790.7-201ENST00000602347 528 ntBASIC3.58□□□□□ -1.84
APOBP04114 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.58□□□□□ -1.84
APOBP04114 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC3.58□□□□□ -1.84
APOBP04114 SCN5A-208ENST00000450102 6284 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOBP04114 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
APOBP04114 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC3.57□□□□□ -1.84
APOBP04114 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 ZNF658B-201ENST00000602828 3408 ntBASIC3.57□□□□□ -1.84
APOBP04114 OR55B1P-203ENST00000641518 2602 ntBASIC3.57□□□□□ -1.84
APOBP04114 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
APOBP04114 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 RNA5SP319-201ENST00000362768 119 ntBASIC3.57□□□□□ -1.84
APOBP04114 MIR130A-201ENST00000385274 89 ntBASIC3.57□□□□□ -1.84
APOBP04114 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC3.57□□□□□ -1.84
APOBP04114 RPL5P22-201ENST00000480199 884 ntBASIC3.57□□□□□ -1.84
APOBP04114 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.57□□□□□ -1.84
APOBP04114 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.57□□□□□ -1.84
APOBP04114 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC3.57□□□□□ -1.84
APOBP04114 AC025574.2-201ENST00000615621 514 ntBASIC3.57□□□□□ -1.84
APOBP04114 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC3.57□□□□□ -1.84
APOBP04114 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
APOBP04114 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
APOBP04114 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC3.57□□□□□ -1.84
APOBP04114 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC3.57□□□□□ -1.84
APOBP04114 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOBP04114 COX6B1P1-201ENST00000415962 213 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms